Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00766 ATGATCAACAGTACAAAAGAAGCAGATTTTCCACTGAAACAGGAAGGTGTTTCTTCAAGTGATCATGAAAAGGCAAAGGCTTCATCGAGTTCATCTTCTCAATGGCTGAAACTGAAGGATCCAAGGATTGTTCGTGTGTCACGAGCCTTTGGAGGAAAAGACAGGCACAGCAAAGTGTGCACAGTAAGAGGGCTAAGAGATAGAAGAGTGAGGCTTTCAGTGCCAACAGCAATTCATCTCTACGACCTTCAAGATAGGCTTGGACTGAATCAACCCAGCAAGGTTGTTGATTGGTTGCTGAATGCAGCAAAGCATGAAATTGATGAACTTCCACCACTTCCAATTCCTCCAGGTAACTTCACCCTTGGTTATCAATCTCTTCTTGCTTGTAATGAAGTTAGCACCTCTCGTGAAGGTTCAGGCCAAAACACAAACACTTTGTGGAAATCAAAGTCAGGAGAAATGGTTAGTGATAAAGCAAATTGGATAAACAGAAATGAAGAAGATGATAGTAATAATAATAATAATAACAATAATAATAATACTGCTGGTGATTGTGATAATAAACACTGTCATGGTGCACATGTTTTTTCAAATAATCTCTTACCAAGACCAAACCATCCTTCATTTTTGGGGTTGATGAACACCATGCCATCACTTGGTTACCAATGGGAGCCTAATTCAGGTGATGTTGCTCAATGGGCAAACCATGGATTTGTTAATCAAACAGATATACACAGCATTAATGTAGTTCCAATCCCCTCAACTTTGGCTCTATCAACACAGCCATATTTCCCTTCACATGTTGCAGCAATGGAGATGAATGCGAGACAACTCAACCACTATCAGATGCTGACTTCAGCTTCTCAAAATCTCTTCGCAAATTCATCTCAGCAACTCATGAGCCAATCTGGGAAAGTGCCATTCAGCTTGGTTAGGCCTAAACTTTTCCATTCTCCTAACAGCAGTGAAAGTCATTCTCGTAAAGACCAGGATTTTCCTTCCAAGTGA 1011 0.4055 MINSTKEADFPLKQEGVSSSDHEKAKASSSSSSQWLKLKDPRIVRVSRAFGGKDRHSKVCTVRGLRDRRVRLSVPTAIHLYDLQDRLGLNQPSKVVDWLLNAAKHEIDELPPLPIPPGNFTLGYQSLLACNEVSTSREGSGQNTNTLWKSKSGEMVSDKANWINRNEEDDSNNNNNNNNNNTAGDCDNKHCHGAHVFSNNLLPRPNHPSFLGLMNTMPSLGYQWEPNSGDVAQWANHGFVNQTDIHSINVVPIPSTLALSTQPYFPSHVAAMEMNARQLNHYQMLTSASQNLFANSSQQLMSQSGKVPFSLVRPKLFHSPNSSESHSRKDQDFPSK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00766 336 MobiDBLite consensus disorder prediction 317 336 - -
Vimu8g00766 336 MobiDBLite consensus disorder prediction 322 336 - -
Vimu8g00766 336 ProSiteProfiles TCP domain profile. 52 110 IPR017887 -
Vimu8g00766 336 Pfam TCP family transcription factor 52 178 IPR017887 -
Vimu8g00766 336 MobiDBLite consensus disorder prediction 1 33 - -
Vimu8g00766 336 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 308 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00766 Vimu-Chr8 14573827 14574882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00766 35 128 TCP Transcription Factor Family AT3G02150 80.208 2.28e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vimu8g00766 TCP 7.5e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00766 - - aprc:113867214 474.937