Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00765 CTTGTGAACTCTGAAAACTTGAAGGATAGCCAAAAAATGTCTAAAAAGGTCTTCACATCGATGAAGGATGAAAATCCAGAGTTGCAGAAGCAAATTGGGTGCATCAGTGGCTTTTTTCAGCTTTTTGACCGCCACAGGTTCCTCACAGGCCAACAAGGTAGCAGCCACAATCAGAACATACAAACTAAAGGTGGAACAAGAAACCAGGTGAAAGAGGTGAATAATACAACTCAAAAGTCAACGGGAAAGAATGTGAAGGTTGCAGGAGAGAATCAGCAATTCTCAACAGAATCATCAGGAACTTCCATGTCTTCATCTTCTCGTTCATCTAGTATGTCATCCCTGGAGTTCAACAGAGCAATTCAGATAGAACCACCATCAATAATCAGTCCAATGAAAATTCCAGAGAACTCTAATCCAGAAATAGAAGTGAAGCAACATGGCAACCAAGGTCCTCAGTCCCTTGATTTCTATGACATTGTAAAAGATTCAATGCATAGAGATGTTCAAGGATTGTCTGTAAAGATTGTGGCTAAAGAGGAAAAGAAAGGTAGAATCTTGAAACACGTTGACTCTCCCAGGCCTTTGGAGCCCCCAAAACCTGTAAATATGGTTGCTTGGGATTCACCGAGACTCTCTTATGATGGGAGGGACACACAAAATTCATTAAAATCTGCTACAAAACCTAAGGAACTCCCCAGGCTTTCCTTGGACAGCAGAGAAGGATCCATCAAAAGCTTCAATGAAGGAACAAAATGTCGTGGCCTTCTGAAGGGTCTACAGAAAGGGTATGGTAGCTCTGGCACAATGCTTAAGCAGCTGCAGGAACCAGAAACTTCTAGAAGATCATCCAGTGTTGTAGCAAGGTTGATGGGACTAGAAACCTTCCCAGACTGTACAGAAGCCTGTGATACTCAACCCAGCAAAAATGAGTCAAATGCAGAACCTTGCACAAATCATGAGCAACACCAGAGTGCAGCATCAATGAAAAGGTCTACCTTTCTTCAGTTTAGGAGGGATGCTTCAATCCTGAATGTCACACCCTATTCACGGTTTTCCCTAGAATCTGAAGCTAGCCAAGGTTCTCAAATACAGACTTCAAAGAGAAATGAATGTTCAGCAAAAGCATCAAACCAATCACTTTCTGTATACGGAGAGATTGAAAAGAGGATAGCAGATATAGAGTTCAAAAACTCTGGAAAGGATCTCAGGGCGCTTAAACAGATTCTTGATGCAATGCAGAGATATAAAGAATCATTTGAGATTACAAGGGACCAAACTTCAAATTCTCTATCTGACAATAGGAGTAATAGCAGTCTCAGTGAAAACTCTGTGGTTAAAAGCCCAAGAATACGGCAGAAGGACCCAGCATCCACCACTTCTGAGATGAGAAATTCAACCCAGGGTAGTAAGTCACCAATTTTCACCATGAAACCAGCAAAAGCTGCAAGACAAACTGGCAAGTTTGGTTCTGCTAATCCTGCAAATGGAATAGTGGGAGAGAAGATTGACAGGAAAACAGCAAAAGGTATCAGTCCAGCAATCAGACAGGCCAAGGATTCCATTGGCCAACCCTTCCACTCAGTGGATAAGAGCAACAACAAGATAAGAACATCAAAATTGTTGCAATCCCCAAAAGTTCCTCAAGTAATCAATGGGGAAAACGCCACCAACTCCAGCAATACAACAGGGGCCAAGAGTCCAAGGCTACAAAAGAAGTTTGGTTTGGAGAGGCGCTCACCAACTACTATCCCATCATCAGAATCATGCAGTAACAGAAGACAACATAATAGGCAATCAGTGGAATTGTCTTCCCCAAGTACTACACCCAGACAAAGATTCAGCGAGACCAAAAACCAAAGGGAGGATTTTAAGCAAGAAGTTGGAGTAGAAGTCATTCACATCGATCAAAGTAATGCAACAAAAGATTTGAGCAAGGAAAGCTTTCAAGTTGAGAAAATAATTACGGCAGAGCAACCAAGCCCCGTGTCTGTTCTTGATGCTGCTTTCTACAATGAAGAACCACCTTCACCGGTCAAAAAGAAATCAGACATCACAAGAGATTTAGATGATCTTTATGATAGCAGTGAGGAGAACTCAGAAGATCTCCCGCTTTTATCCAACAATGCAAAAGCCAACTTCAGCAGTAGAACTCAAAATTTGGTTCAAATTCTCCACCAAATTGATTCCAATGATGAGAGATTTACCAATTTCAGAGACTATAATGATCCTGACCATAAATATATATCAGAAATACTGTTAGCATCAGGGCTTCTCAGCAGTCCAAGCTCTAGCTACGATTTTCACTCATCAAGTCACCCTATAAACCCAAAGTTGTTCCTTGCTCTAGAGCAAATCAAGACAAACAAGAATTGTTTCAACATTGAATACAATGCCAAGAAAATTGCTGGGCTGAGTAGTCCTCAGAAAATGCAAAGAAAGCTAATCTTTGATGTTGTTAGTGACATTCTAGCTCAGAAACTGATATTGGAAAGTTCTACTCCGTGGTGCCAGTCGAATCAGCCAATAAGTAGAAAAATAAGAGGGAAGCTGCTGTTGGATGAGCTTTGCACAGAAATTGATAAGTTGCAACATAAAAATAGGAATGACAAACTGATTAACGAGGATGAGAACATGACAAGCCTCCTGTGGGAAGAGTTGATGCACTATCCCTCAATTTACACAAACAGTTACATGGAAATTCCAAATGTTGTGTTGGATGTTGAACGGTTGATCTTCAAAGATTTGATAACTGAAGTTGTGAGAAGTGAACTACCTAACCATTCTGGTAAGCCTTGCAGGCAGCTATTTTCCCAGTAG 2820 0.4113 LVNSENLKDSQKMSKKVFTSMKDENPELQKQIGCISGFFQLFDRHRFLTGQQGSSHNQNIQTKGGTRNQVKEVNNTTQKSTGKNVKVAGENQQFSTESSGTSMSSSSRSSSMSSLEFNRAIQIEPPSIISPMKIPENSNPEIEVKQHGNQGPQSLDFYDIVKDSMHRDVQGLSVKIVAKEEKKGRILKHVDSPRPLEPPKPVNMVAWDSPRLSYDGRDTQNSLKSATKPKELPRLSLDSREGSIKSFNEGTKCRGLLKGLQKGYGSSGTMLKQLQEPETSRRSSSVVARLMGLETFPDCTEACDTQPSKNESNAEPCTNHEQHQSAASMKRSTFLQFRRDASILNVTPYSRFSLESEASQGSQIQTSKRNECSAKASNQSLSVYGEIEKRIADIEFKNSGKDLRALKQILDAMQRYKESFEITRDQTSNSLSDNRSNSSLSENSVVKSPRIRQKDPASTTSEMRNSTQGSKSPIFTMKPAKAARQTGKFGSANPANGIVGEKIDRKTAKGISPAIRQAKDSIGQPFHSVDKSNNKIRTSKLLQSPKVPQVINGENATNSSNTTGAKSPRLQKKFGLERRSPTTIPSSESCSNRRQHNRQSVELSSPSTTPRQRFSETKNQREDFKQEVGVEVIHIDQSNATKDLSKESFQVEKIITAEQPSPVSVLDAAFYNEEPPSPVKKKSDITRDLDDLYDSSEENSEDLPLLSNNAKANFSSRTQNLVQILHQIDSNDERFTNFRDYNDPDHKYISEILLASGLLSSPSSSYDFHSSSHPINPKLFLALEQIKTNKNCFNIEYNAKKIAGLSSPQKMQRKLIFDVVSDILAQKLILESSTPWCQSNQPISRKIRGKLLLDELCTEIDKLQHKNRNDKLINEDENMTSLLWEELMHYPSIYTNSYMEIPNVVLDVERLIFKDLITEVVRSELPNHSGKPCRQLFSQ 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00765 939 MobiDBLite consensus disorder prediction 421 501 - -
Vimu8g00765 939 MobiDBLite consensus disorder prediction 517 625 - -
Vimu8g00765 939 MobiDBLite consensus disorder prediction 423 474 - -
Vimu8g00765 939 MobiDBLite consensus disorder prediction 50 115 - -
Vimu8g00765 939 MobiDBLite consensus disorder prediction 526 568 - -
Vimu8g00765 939 Pfam Domain of unknown function (DUF4378) 745 919 IPR025486 -
Vimu8g00765 939 PANTHER LONGIFOLIA PROTEIN 13 937 IPR033334 GO:0051513
Vimu8g00765 939 MobiDBLite consensus disorder prediction 302 321 - -
Vimu8g00765 939 MobiDBLite consensus disorder prediction 580 614 - -
Vimu8g00765 939 MobiDBLite consensus disorder prediction 211 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00765 Vimu-Chr8 14563274 14568113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00765 13 937 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.951 1.15e-74 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00765 - - vra:106774015 1701.03