Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00764 ATGAAGAAATTACTTTTAGTCTTGGTCATCTTATTATTTATTGTCAACGCTAGTATTCGTCCAAAGTTGGACCAGGGACTGTTAGAGGATGAAAAAGACTTAGAAGTCTTGATGTATAATATGGTGGTATCTTTAGACAGTAGTCGTAATTTCACTACCATTTCTAAAGCAATAGAAGTTGCTCCTTTGTTTAGTTTCAGGAGAATTATTATAAAAATAAAAGAGGGCATATACCAAGAGAATCTGATATTTCCTCCTAACAAGACTAATATTGTTTGGGTTGGGGATGGAAATATTGGAATTATTTCATTCTCTGTTCATATCTGTGCATTAATGGTGAGAAAATAG 348 0.3276 MKKLLLVLVILLFIVNASIRPKLDQGLLEDEKDLEVLMYNMVVSLDSSRNFTTISKAIEVAPLFSFRRIIIKIKEGIYQENLIFPPNKTNIVWVGDGNIGIISFSVHICALMVRK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00764 115 Gene3D - 17 110 IPR012334 -
Vimu8g00764 115 PANTHER PECTINESTERASE 35 98 - -
Vimu8g00764 115 SUPERFAMILY Pectin lyase-like 40 97 IPR011050 -
Vimu8g00764 115 Pfam Pectinesterase 40 98 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00764 Vimu-Chr8 14531661 14532008 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00764 22 98 Carbohydrate Esterase AT2G26440 42.857 7.44e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00764 - K01051 var:108324670 115.931