Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00763 ATGAAGAAATTACTTTTAGTCATGATCACCTTATTATTTATTGTCAACACTAGTATTCGTCCAAAGTGGGACAAGGGTCTGTTAGAGGATGAAAAAGAATTAGTAGTCTTGAGGTATAATATGGTGGTATCTTTAGACGGTAGTGGTAATTTCACTACCATTTCTAAAGCTATAGAAGTTGCTCCTTTGTCGAGTTCCAGGAGAATTATTATAAAAATAAAATGGGGCATATATCAAGAGAATATGATATTTCCTCCTAACAACATTAATCTCGTTTGGGTTGGGGATGGAAATATTGGAATTATTTTATTCTCTGTTCATATCTGTGCATTAATGGTGAGAAAATAG 348 0.3305 MKKLLLVMITLLFIVNTSIRPKWDKGLLEDEKELVVLRYNMVVSLDGSGNFTTISKAIEVAPLSSSRRIIIKIKWGIYQENMIFPPNNINLVWVGDGNIGIILFSVHICALMVRK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00763 115 PANTHER PECTINESTERASE 34 98 - -
Vimu8g00763 115 Gene3D - 15 107 IPR012334 -
Vimu8g00763 115 Pfam Pectinesterase 40 99 IPR000070 GO:0030599|GO:0042545
Vimu8g00763 115 SUPERFAMILY Pectin lyase-like 37 98 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00763 Vimu-Chr8 14531155 14531502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00763 40 98 Carbohydrate Esterase AT2G26440 45.763 4.75e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00763 K01051 - var:108324670 122.864