Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00761 ATGCGAAAGAGAGAAAAGGGAAAAACGGGAACCGTAGATGAGCATTGGGCGATCTGTGATGGCTGGATGAAGAAGGATATCTCGAAGAATAGAAGACCAATGGGTCCGGGAAAAGAACAGAGAAACCAGAGGCATCACTATCATTACCGGAACCAAAAACGAGCGTGCTGGTTTCAATACCTTGGACACTGCAACTTTGTTGAAAGTGCACATTTTCTGGCAAGTAATATTACTTTCCAAAATACAGCACGACCTTCAAACCACCAAGCCGTTGCCTTAGCCGTAACAGGGACTTTCTCTGCATTTTACAACTGTGAGGTGTTGGAATATCAAGACACTCTATACGTTATGCAGGGTGTATATTTTTTTGTGAAGTGTCTTATTGAAGGCACAGTGGATTTTATTTTTGGCGACACAGCACAAGTGGCATTACAAGACTGTGATATCCAAGTGAGAATTCCTCTCCCAGGTCAACCGAATGTCATAACCGCACAAGGAAGAAGAACAAATAACGATGAAGGTGAAATTGTAATCCAAAGTTGTAGGATTGGTGCCACTCACGACTTTGAAGGCGTAAAAAAGAATTTCAAAACATATTTAGGGAAGCCATGGAAGAATTATTCAAAAACTATTATCATGAAAAGTTATATGAGTGATATAATTGACCCAACTGGCTGGATAGAGTGGGAGGTTACTACTCTTGGTCTTAACACTCTATTTTATAGAGAGTATAATAACATTGGATCTGGTGCTCAAACCTCCAAAAGGGTCACATGGAAGAGATTCAAAGTGATCACTCATGCTGTTGAAGTCGAACCTTTTACTGCAAGAAACTTCATTAATGACTCTCAATGGATTTCTGGGTTTTTTGCAGGTACCATTGCGAGGAGACGAACTCGCAAGATGGAGGTTGCAAGGTTAACGGCGGAGCTTCTTGAAGATGGCCATGGAAGATTCTCTATCGCGATGAAGATGGTGAGGGCACAATTTTGGTGGCGCTTTATGAAGGACAACGGCGATGCTAGGTCGCTGATGGCAAGGTGGGTAAGGTTTTGCCCAGTAGTGGTGGAGGTTGTAGGGGAAGAAGAAGAAGAACGAGGAGGCTCTTAA 1110 0.4261 MRKREKGKTGTVDEHWAICDGWMKKDISKNRRPMGPGKEQRNQRHHYHYRNQKRACWFQYLGHCNFVESAHFLASNITFQNTARPSNHQAVALAVTGTFSAFYNCEVLEYQDTLYVMQGVYFFVKCLIEGTVDFIFGDTAQVALQDCDIQVRIPLPGQPNVITAQGRRTNNDEGEIVIQSCRIGATHDFEGVKKNFKTYLGKPWKNYSKTIIMKSYMSDIIDPTGWIEWEVTTLGLNTLFYREYNNIGSGAQTSKRVTWKRFKVITHAVEVEPFTARNFINDSQWISGFFAGTIARRRTRKMEVARLTAELLEDGHGRFSIAMKMVRAQFWWRFMKDNGDARSLMARWVRFCPVVVEVVGEEEEERGGS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00761 369 ProSitePatterns Pectinesterase signature 2. 128 137 IPR033131 -
Vimu8g00761 369 SUPERFAMILY Pectin lyase-like 61 288 IPR011050 -
Vimu8g00761 369 Gene3D - 31 290 IPR012334 -
Vimu8g00761 369 PANTHER PECTINESTERASE 67 287 - -
Vimu8g00761 369 Pfam Pectinesterase 67 282 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00761 Vimu-Chr8 14516103 14519372 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00761 72 287 Carbohydrate Esterase AT3G14310 61.574 1.76e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00761 K01051 - egr:104419527 273.092