Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00747 CAGCAATTGACGGAAAAGTCTGACGTGTACTCTTTCGGCGTGGTGTTGTTTGAGTTACTCTGCGCTCGTCCGCCTCTGATCCGCACCGCGGAGAAAAAACAGGTGTCACTGGCTGATTGGGCGAGACACTGTTACCAAAACGGGACCATTGCCCAGATTGTTGACCCGACATTGAAGGGGAGGATCGCACCAGAGTGCTTGAGGAAGTTCTGCGAGATAGGGGTGAGTTGTTTGTTGGACGATGGAACGCAGAGGCCGTCGATGAACGACGTCGTTTGGATGCTGGAGTTTGCGTTGCAGTTACAAGAGAGTGCGGAACAGCGCGATAACGCTAACGTGATTGGTGGTGAGGGGGGTAATGAAAGAAGGGAGGAAGGTATGGAAGATTTGTTTAGCAGTGGAACGAGTGTGGGTCAGGTTTCGGATTTTAACAAGAGTAGTGGAAGTGTGGTGAGTGTGAGTACCAGCAGCGAAGAGCTTAGTAGCAGCTATAAAGAGAGTGATAGATTAGTGTCTGGGACTGTTTTCTCTGAAATTGTTGACCCAAAGCCACGTTGA 558 0.5018 QQLTEKSDVYSFGVVLFELLCARPPLIRTAEKKQVSLADWARHCYQNGTIAQIVDPTLKGRIAPECLRKFCEIGVSCLLDDGTQRPSMNDVVWMLEFALQLQESAEQRDNANVIGGEGGNERREEGMEDLFSSGTSVGQVSDFNKSSGSVVSVSTSSEELSSSYKESDRLVSGTVFSEIVDPKPR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00747 185 SUPERFAMILY Protein kinase-like (PK-like) 2 95 IPR011009 -
Vimu8g00747 185 PANTHER OS07G0166700 PROTEIN 1 102 IPR045272 GO:0004714|GO:0006468
Vimu8g00747 185 MobiDBLite consensus disorder prediction 130 150 - -
Vimu8g00747 185 Pfam Protein tyrosine and serine/threonine kinase 2 93 IPR001245 GO:0004672|GO:0006468
Vimu8g00747 185 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g00747 185 MobiDBLite consensus disorder prediction 132 150 - -
Vimu8g00747 185 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00747 Vimu-Chr8 14295335 14298129 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00747 1 185 Receptor kinase-like Gene Family AT3G51550 52.632 5.59e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vimu8g00747 PK_Tyr_Ser-Thr 1.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00747 - - gsj:114381619 297.745