Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00737 ATGATGTTCCTTACTTTCACCGCCTCCTTCTTACTACTCTTCCTTCTTCTACACTTCTCTACACACCTCAAAGCCTATACCCGAGAGGAAATTTTCACCATCAATTGCGGTACCACCGCCAAGTCCTCCGACGGTCAAAGAATATGGACCGGCGACGCAGATACCAAGTACTTATCTCCCCAAGACACCGTTTCAGACAAGGCAACAACACAGTCTACTTCCGCCAATCAAATCCCCTTCTCCACTGCACGTTTGTCCAGTTCCCAATTCAATTACACCTTCCCAGTCTCTCCGGGCCCCAAATTCGTTCGCCTCTTCTTCTACCCTGCTGACTACTCTTCCTTTCTCCGCACCCACGCATCTTTCTCCGTTCAATCCAACCAATTCACTCTCCTCGACTCTTTCAACGCCTCTCTTAACGCTGACGCTCAAGCCATCGACACTATCTTCAAAGAATACGTGGTCAACGTCAAAGACGGTGAGAGTCTTATCCTTACCTTCACACCCTCCCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAAACGATTTATATTACACTCCACCAGATGACCCAGGATTCACTCTCGTGGGACATGATACGCTATTCAGCGTCGGAAGTAGCACTGCCATGGAAACAGTCTATCGTATTAAATCCGGAGGCCAGGAAATCTCACCACAAAACGACACCGGTTTGTTCAGGTATTGGGCTGCCGAAGAAAGTTACTTTATCAAACGTAATCCAAAGAATGATGATCTACCAGCTGACATAGATGGGAAAATGAATATAACCGTGAATCCCGATTACTTGGCACCAAAGGAACTGTTCAGAACAGCACGTAGCATGGGCACAAACGCCACTCTGAACAGAATGAGCAACCTCACTTGGGAGTTTCCCGTTGATTGTGGCTTCAGTTACGTTGTCAGACTCCACTTCTGCGAGCTTGATCCTAATATCAATAACATCGGTGACAGGCGATTCTCAATTTACATAGGGAGTCAGTTGGCTGATGGGAATGCAGATGTAATGGTTTGGAGTCAGAAGCAAAAAGGTCTAGCTGTGCATAAAACTTATGCCGTTTTGATTCCTAAAAATGGTGCTCAGAAAAAGTTTAATCTCTCCCTTCAAATGCACCCTTACGGAAGCAGTGTGGATTCGAGATACGCAGATGCCTTCCTGAACGGTCTAGAGATCTTCAAAACCAATGTAAACAACCTCGCTGGACCCGAGCCGGACCCAATTCAGACTCCTCACAACATCATCCCCGGAAAGACAAGCAGCGGAAATGGAAAAACAAGAATAGTTGTCGTCGCAGGGGTGGGAATCGATGTCGTATTTATCTCTCTTGTGATTTTGTTCCTTGTTGTCTCGAGACACATGAGAACCACTGAAACGAATCCCAGTGTATACAAATCCAAGTCGTTCACAGCCACACAGAAAGCTTCCCTACCGTCCGATCTCTGCCGCCACTTCTCCCTTGAGGAGATCGAAGCCGCCACCAAAAACTTCGACGACGTCTTCATCGTCGGCGTCGGAGGATTCGGTCACGTGTACAAGGGATACATCGACGGCGGCTTCACCCCGGTAGCAATCAAGCGCCTGAAACCGGGTTCGCAGCAGGGTGCGCACGAATTCTTGAACGAGATCGAGATGTTATCGCAGCTCCGCCATCTTCATCTGGTCTCCCTAATCGGATACTGCAACGAGATGAACGAGATGATACTGGTCTACGACTTCATGGCGCGCGGCACCCTACGCGACCATCTCTACAACACGGACAACCCCGCTATCTCGTGGAAGCAGCGCTTGCAGATTGTTATTGGCGCCGCACGAGGGCTGCACTATCTCCACACAGGCGGGAAGCACACGATCATCCACCGCGACGTGAAAACAACGAATATCTTGTTAGATGATAAGTGGGTGGCGAAGGTTTCGGACTTCGGGCTTTCAAGAATCGGGCCAACAGGCACGGAGAAGTCCCACGTGAGTACCCTTGTGAAGGGAAGCTTTGGCTATATAGATCCTGAATACTACAAACGATTTCGTTTAACGGAAAAGTCTGATGTTTACTCTTTCGGGGTTGTGCTGTTTGAGATACTATGTGGTCGTCCAGCTTTGATTCACAATGCAGAGACGCAGCAGGTATCGCTTTCTAACTGGGTGAGACATTCTGACCAAAATGGGACCTTAGCGGAGATTGTGGACCCCACTTTGAAGAATAAGATTGCACCGGAGTGCCTGAAAATGTTTTGTCAAATTGGAATGAGCTGTTTGTTGGAAGATGGGACGAAGAGGCCGTGCATGAAGGACGTGGTTGCGATGTTGGAGTTTACGCTGCAGCTACAAGAAAGTGCAGAGCAACACGCAACTGAAAAGGGAGAGGAAATTAGTGAGGATGGCTTTTCCTTTTCTACTACTGACTTGTATGTGACTACTACGACTTCCACCAGTGACGACAATAGCTATAGTAATAATACGGTGTCGTCTTGGACTCCTTTCTCGGAAATTATGGATCCAAAGCCGCACCTCTCCAAATGCTGGCATAATAAAACCAAAAAGATCGTGGGACCTGTGTACAACAGTAAGACCTTAGCATTTTTGTCTCCACATTCACAGATTTAA 2640 0.478 MMFLTFTASFLLLFLLLHFSTHLKAYTREEIFTINCGTTAKSSDGQRIWTGDADTKYLSPQDTVSDKATTQSTSANQIPFSTARLSSSQFNYTFPVSPGPKFVRLFFYPADYSSFLRTHASFSVQSNQFTLLDSFNASLNADAQAIDTIFKEYVVNVKDGESLILTFTPSHPNSYAFINGIEVLSMPNDLYYTPPDDPGFTLVGHDTLFSVGSSTAMETVYRIKSGGQEISPQNDTGLFRYWAAEESYFIKRNPKNDDLPADIDGKMNITVNPDYLAPKELFRTARSMGTNATLNRMSNLTWEFPVDCGFSYVVRLHFCELDPNINNIGDRRFSIYIGSQLADGNADVMVWSQKQKGLAVHKTYAVLIPKNGAQKKFNLSLQMHPYGSSVDSRYADAFLNGLEIFKTNVNNLAGPEPDPIQTPHNIIPGKTSSGNGKTRIVVVAGVGIDVVFISLVILFLVVSRHMRTTETNPSVYKSKSFTATQKASLPSDLCRHFSLEEIEAATKNFDDVFIVGVGGFGHVYKGYIDGGFTPVAIKRLKPGSQQGAHEFLNEIEMLSQLRHLHLVSLIGYCNEMNEMILVYDFMARGTLRDHLYNTDNPAISWKQRLQIVIGAARGLHYLHTGGKHTIIHRDVKTTNILLDDKWVAKVSDFGLSRIGPTGTEKSHVSTLVKGSFGYIDPEYYKRFRLTEKSDVYSFGVVLFEILCGRPALIHNAETQQVSLSNWVRHSDQNGTLAEIVDPTLKNKIAPECLKMFCQIGMSCLLEDGTKRPCMKDVVAMLEFTLQLQESAEQHATEKGEEISEDGFSFSTTDLYVTTTTSTSDDNSYSNNTVSSWTPFSEIMDPKPHLSKCWHNKTKKIVGPVYNSKTLAFLSPHSQI 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00737 879 FunFam Receptor-like protein kinase FERONIA 586 803 - -
Vimu8g00737 879 Gene3D - 26 187 - -
Vimu8g00737 879 Gene3D - 215 410 - -
Vimu8g00737 879 SUPERFAMILY Protein kinase-like (PK-like) 485 784 IPR011009 -
Vimu8g00737 879 Pfam Malectin-like domain 34 406 IPR024788 -
Vimu8g00737 879 SMART serkin_6 509 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g00737 879 FunFam Receptor-like protein kinase FERONIA 481 585 - -
Vimu8g00737 879 FunFam FERONIA receptor-like kinase 215 408 - -
Vimu8g00737 879 ProSiteProfiles Protein kinase domain profile. 509 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g00737 879 Pfam Protein tyrosine and serine/threonine kinase 515 781 IPR001245 GO:0004672|GO:0006468
Vimu8g00737 879 CDD STKc_IRAK 515 782 - -
Vimu8g00737 879 FunFam FERONIA receptor-like kinase 31 187 - -
Vimu8g00737 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Vimu8g00737 879 Gene3D Transferase(Phosphotransferase) domain 1 586 809 - -
Vimu8g00737 879 Gene3D Phosphorylase Kinase; domain 1 469 585 - -
Vimu8g00737 879 PANTHER OS03G0124300 PROTEIN-RELATED 5 476 IPR046957 GO:0004672
Vimu8g00737 879 ProSitePatterns Protein kinases ATP-binding region signature. 515 538 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00737 Vimu-Chr8 14250157 14252820 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00737 26 846 Receptor kinase-like Gene Family AT3G51550 47.727 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vimu8g00737 Malectin_like 7.4e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00737 - - var:108344516 1493.4