Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00734 ATGCCAAACGATTTATATTACACTCCACCAGATGACCCAGGATTCACTCTCGTGGGACATCGTTCGGTCCATCCACGCGTTCACCAACGCGTCCGGTGCCAGACCGGACGACCAAGCGTTCACCAACGCAGGTTCATGGCCGCACATGATAATTCGTTTGAAGAAAAGATTTTCTTCCGCTTAACGCTTGACGATGTCAATGAAGTTTATGATCTTGACATCTACCTTAAACACCCTATGATGGATTCAATCTTCCTGCTGACTACTCTTCCTTTCTCCGCACCCACGCATCTTTCTCCAGAATACGTGGTCAACGTCAAAGACGGTGAGAGTCTTATCCTTACCTTCACACCCTCCCATCCAAACTCCTACGCTTTCATCAATGGAATCGAGGTGCTTTCCATGCCAAACGATTTATATTACACTCCACCAGATGACCCAGGATTCACTCTCGTGGGACATGATACGCTATTCAGCGTCGGAAGTAGCACTGCCATGGAAACAGTCTATCGTATTAAAACCGGGGGCCAGGAAATCTCACCACAAAACGACACCGGTTTGTTCAGGAATTGGGCTGTCGAGGGAAGTTATTTTATCAAACACAATCCAAGGAATGATGATCTACCAGCTGACATGGATGGAAAAATGAATATAACCGTGAATCCCGATTACTTGGCACCAAAGGAACTATTCAGAACAGCCCGTAGCATGGGCACAAACGCCACCCTGAACAAAATGAGCAATCTCACTTGGGAGTTCCCCGTTGATTCTGGCTTCACTTACGTTGTCAGACTCCACTTCTGCGAGCTTGATCCCAATATTAATGACATCGGTGACAGGCAGTTCTACATTTACATAGCGAGCCAGTTGGCTGAAGCACGTTCAGATGTAATGAAATGGAGTCAGAAACAAAAAGGTCTAGCTGTGCATAGAAACTACGTTGTTTTGACTCCCAACAATGGTACTCAGAAAAAGTTTAATCTCTCCCTTCAAATGCACCCTTACGAAAGCAGCGTGGATACGAGATACAGCGACGCCTTCCTGAACGGTCTAGAGATTTTCAAAATCAGCGACACTAGGTCTAACAACCTCGCCGGACCTAACCCGGACCCGATTGAGACACCACATCAAAAGGAAAATAGCAGAAGCAGAACCAAAAACCTGATAATTGGTCACACGTTGAAGGTAGTTTCCGGTGTCGTTTTCATCTTGCTTGTCGTTTTCTCTATCCGGTTGTTGACAACTTCCAAGTGGAGTGCACTGTTGTTCTCAACGACCAAGTCAACCAAGCGACACAATTTTTCTCTGCCTTCTGATCAATGCCGCCGGTTTTCTCTAGTCGAGATCAAAGCCGCCACCAAAAACTTCGACAACGTCCTTATCGTCGGCGACGGAGGATTTGGACACGTATATAAGGGCTACATCGACGACGGCTCAGTCCCCGTCGCTATCAAGCGCCTTAGACAGGGTTCCCAGCAGGGGGCTAGCGAGTTCGTTAATGAGATCCAGATGCTCTCGCAACTCCGCCACCGCCATCTCGTCTCACTCATCGGTTACTGCTGCGATAACAATGAGATGATCCTCGTTTACGAGTTCATGAGACGTGGAAACCTCCGTGAACATCTCTACGGCACCGATAACCCCCCTCTCTCGTGGAAGCAGCGGTTGAAGATTTGCGTTGGCGCTGCGCGCGGACTACGCTATCTTCACAGTGGCGCGAAACACATGATCATCCACCGTGACGTGAAAACGACGAACATCTTGTTGGATGAGAAATGGGTGGCGAAGGTTTCGGATTTCGGGCTATCCAAAATTGGGCCGAATGAGATGTCGAAGGCCCATGTGAGCACCGCCGTGAAAGGCAGCTTTGGGTATTTGGATCCGGAATATTACATTCGACAGCGGCTGACGGAGAAGTCTGACGTGTATTCTTTTGGGGTGGTGTTGTTTGAGGTACTCTGTGCCCGTTCTCCTCTGGTCCTTACTGAAGATATCGAACAGGTGTCACTAGCTAATTGGGCCAGATACTGTTGCCAAAATGGTATAGTGACGGAGATTTTGGACCCCACATTGAAGGGAAAGATGGCTCCCGATTGTTTGGCCAAGTTTTGTGAGATTGGGGTGAGTTGTTTATCACAAGAGGGGATACAGAGGCCTTCCATGAACGATGTCGTTTTGATGTTAGAGTCTGCATTGAAACTGCAAGAGAGTGCCGACCGAGGCGCAACACAGGAAGATATTGACCATGTGCTTGATCTTGGAGAGCACCACAGTAGTTGCAAGGACAATGATAAGTTGATGTTGGAGCTGTTTTCTGAGATTGTCGACCTAGAGCCACGTTGA 2343 0.481 MPNDLYYTPPDDPGFTLVGHRSVHPRVHQRVRCQTGRPSVHQRRFMAAHDNSFEEKIFFRLTLDDVNEVYDLDIYLKHPMMDSIFLLTTLPFSAPTHLSPEYVVNVKDGESLILTFTPSHPNSYAFINGIEVLSMPNDLYYTPPDDPGFTLVGHDTLFSVGSSTAMETVYRIKTGGQEISPQNDTGLFRNWAVEGSYFIKHNPRNDDLPADMDGKMNITVNPDYLAPKELFRTARSMGTNATLNKMSNLTWEFPVDSGFTYVVRLHFCELDPNINDIGDRQFYIYIASQLAEARSDVMKWSQKQKGLAVHRNYVVLTPNNGTQKKFNLSLQMHPYESSVDTRYSDAFLNGLEIFKISDTRSNNLAGPNPDPIETPHQKENSRSRTKNLIIGHTLKVVSGVVFILLVVFSIRLLTTSKWSALLFSTTKSTKRHNFSLPSDQCRRFSLVEIKAATKNFDNVLIVGDGGFGHVYKGYIDDGSVPVAIKRLRQGSQQGASEFVNEIQMLSQLRHRHLVSLIGYCCDNNEMILVYEFMRRGNLREHLYGTDNPPLSWKQRLKICVGAARGLRYLHSGAKHMIIHRDVKTTNILLDEKWVAKVSDFGLSKIGPNEMSKAHVSTAVKGSFGYLDPEYYIRQRLTEKSDVYSFGVVLFEVLCARSPLVLTEDIEQVSLANWARYCCQNGIVTEILDPTLKGKMAPDCLAKFCEIGVSCLSQEGIQRPSMNDVVLMLESALKLQESADRGATQEDIDHVLDLGEHHSSCKDNDKLMLELFSEIVDLEPR 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00734 780 FunFam receptor-like protein kinase FERONIA 420 532 - -
Vimu8g00734 780 SMART serkin_6 456 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g00734 780 Pfam Protein tyrosine and serine/threonine kinase 462 726 IPR001245 GO:0004672|GO:0006468
Vimu8g00734 780 Pfam Malectin-like domain 67 356 IPR024788 -
Vimu8g00734 780 Gene3D Phosphorylase Kinase; domain 1 416 532 - -
Vimu8g00734 780 ProSitePatterns Protein kinases ATP-binding region signature. 462 485 IPR017441 GO:0005524
Vimu8g00734 780 ProSiteProfiles Protein kinase domain profile. 456 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g00734 780 SUPERFAMILY Protein kinase-like (PK-like) 440 731 IPR011009 -
Vimu8g00734 780 Gene3D Transferase(Phosphotransferase) domain 1 533 755 - -
Vimu8g00734 780 FunFam FERONIA receptor-like kinase 164 357 - -
Vimu8g00734 780 Gene3D - 164 357 - -
Vimu8g00734 780 MobiDBLite consensus disorder prediction 362 383 - -
Vimu8g00734 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 577 589 IPR008271 GO:0004672|GO:0006468
Vimu8g00734 780 FunFam Receptor-like protein kinase FERONIA 533 749 - -
Vimu8g00734 780 CDD STKc_IRAK 462 729 - -
Vimu8g00734 780 PANTHER OS07G0166700 PROTEIN 440 735 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00734 Vimu-Chr8 14231917 14234374 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00734 101 765 Receptor kinase-like Gene Family AT3G51550 50.214 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vimu8g00734 Malectin_like 1.7e-28 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00734 - - vra:106770147 1072