Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00731 ATGGCTATCACCATCTCCTTAACATTCTTTTTCCTCCTTCTACACTTCTCCACAGGCCTCCAAGCCTACACCTCAGAGGAAGTTTTCACCATCAATTGCGGCACCGCCGGAAACTCCTCCGACGGTCAAAGAACGTGGACCGGCGACGCAGACACAAAGTACTTATCTCCCCAAGACACCACCGTTTCAGACAAGGCCCCAACGCAGTCTCCTTCAACCAATCAAGTCCCCTTCTCCACTGCACGCTTGTCCCGTTCCCAATTCAATTACTCCTTCCCTGTCTCCCCAGGCACCAAATTCCTTCGCCTCTTCTTCTACTCTGCAGACTACCCTTCATTTCCCCGCACCCATGCATCGTTTTCCGTTCAATCCAACCAATTTACTCTCCTCAACGATTTCAACGCCTTTCTTAACGCCGACGCTCAAGCCACCGACACTATATTCAGGGAATACGTGGTCAACGTCAACGACGGTGAGAGGCTTATCCTCACCTTCACTCCCTCGCATCCAAAATCTTACGCTTTCATCAATGGAATCGAGATACTTTCCATGCCAACAGATTTATATTACACAACAAATGAAACAGGCTTCACGAACGTCGGGACTAGCACCCTGTACAGTGTTGGAACCAGATTTGCTCTTCAGACTGAGTATAGAATCAAAGCCGGAGGACAAGAAATCTTACCATATAACGACAGCGGTTTGTTCAGGGATTGGGCTGCCGAAGAACGTTACTTTATCAAACACAATCCAAAGAATGATGATCTAGCAGCTGAGATGGATGGGAAACTAAACATAACCGTGAATCCCGATTACGTGGCACCAAAGGAACTTTTCAGAACAGCGCGTAGCATGGGCAGATACGCCACTCTGAACAGAATGAGCAACCTCACTTGGGAGTTCCCCGTTGATTGTGGCTTCACTTACATTCTCAGACTCCACTTCTGCGAGCTTGATCCCTATATTAATGACATCCATGACAGGCAGTTCGATATTTACATAGCGAGCCAGTTGGCTGAAGTACGTGCAGATGTAATGAAATGGAGTCAGAAACAAAAAGGTCTAGCTGTGTATAAAAACTATGCCGTTTTGATTCCCAAGAATGGTGCTCAGAAAAAGTTTAATCTCTCGCTTCAAATGCACCCTGACGGAAGCAATGTGGATTCTAAATATGCAAACGCCTTCCTTAACGGTCTCGAGATCTTCAAAATCAGTGATGGCTCAAACAACCTAGCTGGTCCAAACCCAGATCCGGTTCACACTCCACAGAACAACATTCCCGGCCAAAACGGAAAGACCATAGCAGGGGTGGTGTCTGGTGTCGTTCTGATCTTGATAATCGTTTTCCTTGTAGTGTTTTTACGATACAAGAGAAACACTTATACTAAGAGCAGGGATTGCGAATCCAAGTCAACGACCATCTTCCTGCCGACAGATCTCTGCCGCCGCTTCTCCATCGCCGAGATGAGAGTGGCCACCCAAAACTTTGACGAAGTCTTGATCATCGGCACCGGGGGATTCGGCCAAGTGTACAAGGGCTATATCGACGAGGGCTCCGTTCCCGTAGCCATCAAGCGCCTTAAACCGGATTCGCAGCAAGGGGTTCGGGAGTTCCTGAACGAAATTAAGATGCTCTCACAACTTCGCCACCTCAATCTCGTGACCCTCATCGGATACTGCAACGATAATAAGGAAATGATCTTGGTCTACGATTTCATGACACGTGGCAACCTCCGTGACCATCTATACAACACGAAAAACCCAGCTATCTCGTGGAAGCAGCGGTTGCAGATCTGCATCGGCGCGGCGCGTGGACTTGATTATCTTCACACAGGCGCGCAGCACACGATCATCCACCGGGACGTGAAAAGCACGAACATCCTGTTGGATGATAAGTGGGTGGCCAAGGTTTCAGACTTTGGACTTTCGAGGCTTGGACCCATTGGAACTTCGAAGGCTCACGTCAGCACCGACGTGAGGGGAAGCTTCGGATATTTGGATTCTGAGTATTATAAACGATATCGTTTGACGGAGAAGTCTGACGTGTACTCTTTCGGAGTTGTGCTTTTTGAGATACTGTGTGGTCGTCCCCCTTTGATTCACAGTGCGGAGAAGCAACAGGTGTCGCTCTCCAATTGGGTGAGACATTGTTACGAAAGTGGAATGATAGAAGAGATTGTTGAGCCGACGTTGAAGAAGGAGATTGCGGCAGAATGCTTGAAGAAGTTTTGTGAGATTGGGATGAGCTGTTTGCTGGAAGATGGGTCGCTGAGGCCCTCCATGGAAGATGTGGCTGGGATGTTAGAGTTTACGCTGCAGCTACAAGAAAGTGCAGAGCAACGTGAAGACGTGGCTAATGTTATTCTTAACTGA 2373 0.4817 MAITISLTFFFLLLHFSTGLQAYTSEEVFTINCGTAGNSSDGQRTWTGDADTKYLSPQDTTVSDKAPTQSPSTNQVPFSTARLSRSQFNYSFPVSPGTKFLRLFFYSADYPSFPRTHASFSVQSNQFTLLNDFNAFLNADAQATDTIFREYVVNVNDGERLILTFTPSHPKSYAFINGIEILSMPTDLYYTTNETGFTNVGTSTLYSVGTRFALQTEYRIKAGGQEILPYNDSGLFRDWAAEERYFIKHNPKNDDLAAEMDGKLNITVNPDYVAPKELFRTARSMGRYATLNRMSNLTWEFPVDCGFTYILRLHFCELDPYINDIHDRQFDIYIASQLAEVRADVMKWSQKQKGLAVYKNYAVLIPKNGAQKKFNLSLQMHPDGSNVDSKYANAFLNGLEIFKISDGSNNLAGPNPDPVHTPQNNIPGQNGKTIAGVVSGVVLILIIVFLVVFLRYKRNTYTKSRDCESKSTTIFLPTDLCRRFSIAEMRVATQNFDEVLIIGTGGFGQVYKGYIDEGSVPVAIKRLKPDSQQGVREFLNEIKMLSQLRHLNLVTLIGYCNDNKEMILVYDFMTRGNLRDHLYNTKNPAISWKQRLQICIGAARGLDYLHTGAQHTIIHRDVKSTNILLDDKWVAKVSDFGLSRLGPIGTSKAHVSTDVRGSFGYLDSEYYKRYRLTEKSDVYSFGVVLFEILCGRPPLIHSAEKQQVSLSNWVRHCYESGMIEEIVEPTLKKEIAAECLKKFCEIGMSCLLEDGSLRPSMEDVAGMLEFTLQLQESAEQREDVANVILN 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00731 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Vimu8g00731 790 Gene3D Phosphorylase Kinase; domain 1 481 572 - -
Vimu8g00731 790 Pfam Malectin-like domain 31 404 IPR024788 -
Vimu8g00731 790 SMART serkin_6 496 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g00731 790 Gene3D - 23 185 - -
Vimu8g00731 790 Gene3D - 213 405 - -
Vimu8g00731 790 FunFam receptor-like protein kinase FERONIA 457 572 - -
Vimu8g00731 790 CDD STKc_IRAK 502 769 - -
Vimu8g00731 790 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Vimu8g00731 790 Gene3D Transferase(Phosphotransferase) domain 1 573 789 - -
Vimu8g00731 790 SUPERFAMILY Protein kinase-like (PK-like) 473 771 IPR011009 -
Vimu8g00731 790 PANTHER OS03G0124300 PROTEIN-RELATED 7 463 IPR046957 GO:0004672
Vimu8g00731 790 MobiDBLite consensus disorder prediction 57 76 - -
Vimu8g00731 790 FunFam FERONIA receptor-like kinase 28 185 - -
Vimu8g00731 790 FunFam FERONIA receptor-like kinase 212 405 - -
Vimu8g00731 790 FunFam Receptor-like protein kinase FERONIA 573 788 - -
Vimu8g00731 790 ProSiteProfiles Protein kinase domain profile. 496 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vimu8g00731 790 Pfam Protein tyrosine and serine/threonine kinase 502 765 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00731 Vimu-Chr8 14214041 14216413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00731 23 780 Receptor kinase-like Gene Family AT3G51550 47.696 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vimu8g00731 Malectin_like 2.6e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00731 - - var:108344516 1174.07