Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00730 ATGACTGAAGCAGCATCAGCAGCACCTCTCAAAGTTATCCAAGTTTGTTCGGTGGCACCACTTCAGGAACCAACCCTTTCCACCCTTGTTCCAACCTCTCTTCCATTAACCTTCTTCGACCTCTTATGGCTTCGATTTCCACCTGTTCAACGTCTCTTCTTCTATCACTTCCCACACCCAACCTCTTCATTCCTTCACTCTCTTCTTCCCTCTCTCAAGCACTCTCTTTCCCTCACTCTCCAACACTTCCTCCCTTTCTCTGGCACCCTCACATGGCCCTCTCACTCTCCCAAACCCATCATCAACTATCTCCCCGGCGACACTGTTTCCTTCACTGTTGCTCAGTCCGACCTAAACTTCGACCATCTTTGCTCCCGTCTCTGTGAAGCATCACAACGCAACGATTTAGTACCCCACTTGGCCAATTCCCATGATAAAGCATCTCTGTTGGCGGTTCAAGTCACTCTGTTCCCAAACGCTGGCTTTTGCATTGGAGTAACCACACACCATGCAGCTTTCGACGGAAAATCTTCATCCATGTTCATCAAAGCATGGGCCTATATATGCTCTAACCTTCAAAACCCTACTACACCCACACCAACACCATCCTTACCTCATCATCTTTCGCCTATCTTTGACAGATCATTGATTAGAGACCCTTCTGGGTTGGCTGAACTGTACGCAGACCAGTGGATGAATCATAATGGTTCTAATAACCGAAGTCTCAAGGTGTGGGAGCCTCTCACTGCAACACCGAGCGATGGACTCAAAGGTTTTTTTGAATTGACCCCTTCACAGATTCAAAAGCTCAAACAATACGGAAACTCTAAGGTGAAAGTGGCTGTTCATCTGTCAACATTCTCTGTTACGTGTGCGTATGTGTTAGCGTGTTTGGTTAAAGCGAAGCAAGTGAAGGAAGAAAATGTGGTGTACATATTTGCTGTTGAATGTAGAAGGCGCTTGGATCCTCCAATTCCAGCCACGTATTTTGGAAACTGCATTAGCGGACAATACGTTGTGGCTTTGACTAAGGAGTTGATTGGAAAAGATGGGTTCATTTGTGCTTTGGAGGGGATAGTTGAGGCTTTGAATAGGGTGAAGGAAGAGGGAGTGTTGAAAGGAGCAGAAAGATCGGTTTCTATTATGCATGACGCTGGGGAGGTTAAAAAAATTTCTACTGCTGGGTCTCCGTTGTTTGAGGTTTATAGCATTGATTTTGGGTGGGGAAGGCCAAAGAAGGTGGATATGGTATCCGCAGACAAAACAAGAGCATTTTCTATCAGTGAAAGTAGGGATATCAATGGAGGAATTGAGATTGGATTGGTGTTACCTAAAAGTGAGATGGAAGATTTTACTTCCCTTTTTCTTCAAGGGCTTGATTCCTGTATTGGGTGTGGAAATGAAAGTCAACAGTCCAATGTCTGA 1425 0.4526 MTEAASAAPLKVIQVCSVAPLQEPTLSTLVPTSLPLTFFDLLWLRFPPVQRLFFYHFPHPTSSFLHSLLPSLKHSLSLTLQHFLPFSGTLTWPSHSPKPIINYLPGDTVSFTVAQSDLNFDHLCSRLCEASQRNDLVPHLANSHDKASLLAVQVTLFPNAGFCIGVTTHHAAFDGKSSSMFIKAWAYICSNLQNPTTPTPTPSLPHHLSPIFDRSLIRDPSGLAELYADQWMNHNGSNNRSLKVWEPLTATPSDGLKGFFELTPSQIQKLKQYGNSKVKVAVHLSTFSVTCAYVLACLVKAKQVKEENVVYIFAVECRRRLDPPIPATYFGNCISGQYVVALTKELIGKDGFICALEGIVEALNRVKEEGVLKGAERSVSIMHDAGEVKKISTAGSPLFEVYSIDFGWGRPKKVDMVSADKTRAFSISESRDINGGIEIGLVLPKSEMEDFTSLFLQGLDSCIGCGNESQQSNV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00730 474 Gene3D - 252 462 IPR023213 -
Vimu8g00730 474 Gene3D - 10 243 IPR023213 -
Vimu8g00730 474 PANTHER - 10 461 - -
Vimu8g00730 474 Pfam Transferase family 33 453 - -
Vimu8g00730 474 SUPERFAMILY CoA-dependent acyltransferases 244 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00730 Vimu-Chr8 14196704 14201110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00730 54 411 Monolignol Biosynthesis Gene Families AT5G48930 27.249 9.79e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00730 - - gmx:100800849 627.476