Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00723 ATGGTTATGTTTCCAGATTCACCACATCTAGCATCAGTTGTTTCCAATCATGGACCTGATAAAAGTAGTATTACACCTTTAGTTCGATGTACTCGTCATATGTGTCCTATCCGAGTTCACTGGCATGTTAAGCTGAACTACAAGGAGTACTGGCGCGTGAAGGTCACTGTTACTAATTTCAATTACAGGATGAACTATTCGGACTGGAACTTGGTTGTTCAACATCCAAACTTTGACAATCTGACCCAGCTTTTCAATGATACCGCAATGTTGTGGGGAGTTAAGTTCTACAATGATTTTCTCATGCAAGCTGGTTCTGATGGTAATGTACAGTCAGAACTACTATTCAAAAAAGATAAATCAACTTTCACTTTTGACAAGGGTTGGGCCTTCCCTCGGAGAGTCTATTTCAATGGTGACGTTTGTGTGATGCCACCACCTGATGCCTATCCATGGTTACCTAATACTGGTTCCAGGCAAGAGGTTTCCCTGCTTGTTTTGATGATGACCTCTTTGGTGGCCTTAGTATTGCATGCATACGCTTAA 546 0.4158 MVMFPDSPHLASVVSNHGPDKSSITPLVRCTRHMCPIRVHWHVKLNYKEYWRVKVTVTNFNYRMNYSDWNLVVQHPNFDNLTQLFNDTAMLWGVKFYNDFLMQAGSDGNVQSELLFKKDKSTFTFDKGWAFPRRVYFNGDVCVMPPPDAYPWLPNTGSRQEVSLLVLMMTSLVALVLHAYA 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00723 181 PANTHER PROTEIN COBRA 6 171 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00723 Vimu-Chr8 14102595 14107169 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00723 5 166 COBRA Gene Family AT5G60920 69.143 1.36e-89 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00723 - - gmx:100797383 321.242
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g00723 8 14102595 14107169 Vimu6g01040 6 11090443 11091032 PCT
Vimu6g01041 6 11101253 11103511 Vimu8g00723 8 14102595 14107169 PCT