Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00703 ATGTTGGGAACTTCAGGGAAGTTTAGAGAGCAACACTTAACCAAGGTTGCCTTTGTCATGTTTAGTGACTACACTAGTATGGAAAATGTCCTTGAACGATATGAGAGACACGCCCACATAGGGCAACTTGTTGAAGATGGTGATGAATCACAGGGCAACTGGTCCTTGCAATGCTTCAAGCTCACCGGCAAAGTTGAAGTCTTAGAGAAAAACTTAAGGAACTTTGTTGGACAAGATCTGGATCCCTTGAACTTGAGAGAGCTTCAGAGTTTGGAGCATCAGCTTGACACAGCTATAAAGCGCATCCGAACTAGAAAGAACCAAGTGATGAATGAATCGATCTCAGATCTGCAGAAAAAGGCAAAGCAACTGCAGGAGCAAAATGGGACGCTTACAAAGAAGATTAAGGACAAAGGAAAGGCAGTGGCTGAACGTTCACAATGTCCTCCACAGCTACAACTACATCATAGACTTGTTCCTTCTTTAACACCTGCTCAGAATTCAGAAGCAGTAGGAGCAATGGAGGAAGTGGATGAAGGAGGAGCAGTTCCTAGTACAACTACTCTGATACCATCATGGATGCTGCATCAGTTTGCGAGATGA 603 0.4395 MLGTSGKFREQHLTKVAFVMFSDYTSMENVLERYERHAHIGQLVEDGDESQGNWSLQCFKLTGKVEVLEKNLRNFVGQDLDPLNLRELQSLEHQLDTAIKRIRTRKNQVMNESISDLQKKAKQLQEQNGTLTKKIKDKGKAVAERSQCPPQLQLHHRLVPSLTPAQNSEAVGAMEEVDEGGAVPSTTTLIPSWMLHQFAR 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00703 200 Pfam K-box region 48 135 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu8g00703 200 ProSiteProfiles K-box domain profile. 51 141 IPR002487 GO:0003700|GO:0005634|GO:0006355
Vimu8g00703 200 Coils Coil 88 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00703 Vimu-Chr8 13877322 13889397 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00703 27 195 MADS-box Gene Family AT5G60910 47.753 8.49e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00703 K09264 - gmx:100787971 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01053 6 11211736 11218228 Vimu8g00703 8 13877322 13889397 PCT