Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00682 ATGGTGCCTGGGCTTCTTGCTATAATCTTTACAGGTTTCTTGACAGAGAAGTCAATTGAGTTCCTGATTAGGAATTCTAGGGCAGGGAATCTTCCCTCTTATGGGAGTCTCATGAGGGATTCTTTTGGGAAATTTGGAAAAGCTTTGGTGGAGATATTTGTTATAGTCAACAACATTGGTGTGTTGATTATTTACACGATTATACTTGTTGCTGTGGATCGACACAACATAGCAACTAAAAGGGACAAGATTCTATCAGTCTTTATGATATTCTTGGCTGTCCTGTCAAATGCTGTGGCTTTATACAGTGATACTTATGCCTTGATCAAGAAGAACAAAACTTATACATGA 351 0.3818 MVPGLLAIIFTGFLTEKSIEFLIRNSRAGNLPSYGSLMRDSFGKFGKALVEIFVIVNNIGVLIIYTIILVAVDRHNIATKRDKILSVFMIFLAVLSNAVALYSDTYALIKKNKTYT 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00682 116 PANTHER AMINO ACID TRANSPORTER 1 83 - -
Vimu8g00682 116 Pfam Transmembrane amino acid transporter protein 1 69 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00682 Vimu-Chr8 13585593 13590134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00682 1 69 Amino Acid or Auxin Permease AAAP Family AT5G38820 50.725 3.90e-18 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00682 K14207 - gmx:100791286 112.464