Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00681 ATGACTATTGTGAACCTAGAACCCAGGGCAAAGAAGACAAAATCAAGGAAGAACAAAGCAGTAGCTGATGAGAAGTCACCTTTGATACCTAAAACCCTCGAGGCTGATTCTTCAGGGTTTGATGATTTCAATGGTGCTTCATTTTCTGGGGCAGTTTTCAACTTGTCCACCACAATTATTGGTGCTGGGATCATGGGGTTGCCCGCATGTGTTAAAAAATTGGGGATGATACCTGGTCTTCTTTCTATAATCTTGATTGCTTTGTTGACAGAGAAGTCAATTGGGTTCATGATTAGGATTTCCCGGGCAGGGAATCTTTCTTCTTATGCCACTCTGGTGGGGGATACATTTGGCAAATTTGGAAAAGCCCTGGTGCAGATATGTGTCATAGTCAACAACATTGGAATGCTTATCATTTACATGATTATTATCGGTGATGTGATTTCTGGAACATCTTCTGGTGGAGTTCATCATTCTGGTTTACTTGAAGGATGGTTTGGAGTTTACTGGTGGACAGGACGTACATTTGTTCTTCTTGTTATAACACTTTCTGTGTTTGCACCTTTGTCCTGCTTCAAGCGCATCGATTCGTTGAGATACACTTCTGCATTATCATTTGGTTTAGCAGTTGTCTTTCTCGTCATTGCTGTGGGAATTTCAATTTTCAAGATTGTAATTGGAGGCATTGGGATGCCTAGATTATTCCCTATCATTACTGATGTTTCCTCAGTTTTTGAACTATTTACAGTAACTCCTGTGGTTGTCACAGCCTACCTATGCCACTTCAATGTACACCCCATAGACAATGAACTCGAGGATTCATCACAGATTCGTGGGGTGGTGCGTGCTTCCCTTGCTCTATGTGCTTCAGTGTACTTATTGACAAGTTTCTTTGGGTTCCTCCTATTTGGTGAAGGAACTCTGGATGATGTGCTTGCAAATTTTGACACTGATCTTGGGATTCCTTTTGGTTCTGTGCTCAACGATGCTGTTCGTGCTACCTATGCTGCACATCTTATGCTTGTATTTCCAGTTGTCTTCTATGCAGTGCGGATCAACCTTGATGGTCTTTTATTTCCATCATCTAGGCCTCTGGTTCTAGATAACGTCAGATTTGCAATGATTACTGTGGCCCTTATTGTTATTTCCTTTTGGGGAGCAAATTTCATACCCAGCATCTGGGATATTTTCCAGTTCACAGGAGCAACGGCTGCAGCATGTTTAGCATTCATATTTCCAGCTGCCATCATCCTTAAGGATCGTTACAACATTGCAACAAATAGGGACAAGATTCTATCTGTCTTCATGATAGTCCTCGCAGTCTTTGCAAATGTTGTGGCTATATACAGTGATGCACTTGCCTTGATCAAGACTAGTCTTAGCTCAATGGGAGTGATTTCATGA 1404 0.4174 MTIVNLEPRAKKTKSRKNKAVADEKSPLIPKTLEADSSGFDDFNGASFSGAVFNLSTTIIGAGIMGLPACVKKLGMIPGLLSIILIALLTEKSIGFMIRISRAGNLSSYATLVGDTFGKFGKALVQICVIVNNIGMLIIYMIIIGDVISGTSSGGVHHSGLLEGWFGVYWWTGRTFVLLVITLSVFAPLSCFKRIDSLRYTSALSFGLAVVFLVIAVGISIFKIVIGGIGMPRLFPIITDVSSVFELFTVTPVVVTAYLCHFNVHPIDNELEDSSQIRGVVRASLALCASVYLLTSFFGFLLFGEGTLDDVLANFDTDLGIPFGSVLNDAVRATYAAHLMLVFPVVFYAVRINLDGLLFPSSRPLVLDNVRFAMITVALIVISFWGANFIPSIWDIFQFTGATAAACLAFIFPAAIILKDRYNIATNRDKILSVFMIVLAVFANVVAIYSDALALIKTSLSSMGVIS 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00681 467 Pfam Transmembrane amino acid transporter protein 46 449 IPR013057 -
Vimu8g00681 467 MobiDBLite consensus disorder prediction 1 23 - -
Vimu8g00681 467 PANTHER AMINO ACID TRANSPORTER 44 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00681 Vimu-Chr8 13575995 13580397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00681 1 459 Amino Acid or Auxin Permease AAAP Family AT3G30390 62.826 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00681 K14207 - gmx:100785277 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g00681 8 13575995 13580397 Vimu6g01097 6 11456203 11456737 PCT