Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00673 ATGATATCAAACCGAGAATCCGCACGTAGGTCACGGATGAGGAAGCAGAAACACCTTGACGAGCTTTGGTCACAGGTCATGTGGCTCAGGAATGAGAACCACCAACTCATAGACAAACTCAACCATGTCTCAGAAAACCATGACCAAGTTCTCCAAGAAAATGCTCAGCTCAAAGAAGAAGCCTCTGAACTTCGCCAAATGATCAGGGACATGCAGATACACAGCCCTTCTCCCTCTTTCACTCCTTTCCAAGATCACCATGTCACTTCCACCTCACCGTATCTCAGATCCGATTCTTCAAACCAATCCAACTCCTGTAACAACATCGATCTCCTTGGCTGA 342 0.4678 MISNRESARRSRMRKQKHLDELWSQVMWLRNENHQLIDKLNHVSENHDQVLQENAQLKEEASELRQMIRDMQIHSPSPSFTPFQDHHVTSTSPYLRSDSSNQSNSCNNIDLLG 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00673 113 CDD bZIP_plant_GBF1 1 48 IPR045314 GO:0003700|GO:0006355
Vimu8g00673 113 Pfam bZIP transcription factor 1 54 IPR004827 GO:0003700|GO:0006355
Vimu8g00673 113 Coils Coil 40 74 - -
Vimu8g00673 113 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 1 57 IPR004827 GO:0003700|GO:0006355
Vimu8g00673 113 MobiDBLite consensus disorder prediction 70 113 - -
Vimu8g00673 113 FunFam BZIP transcription factor 1 45 - -
Vimu8g00673 113 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 78 IPR044521 -
Vimu8g00673 113 Gene3D - 1 49 - -
Vimu8g00673 113 SMART brlzneu 1 56 IPR004827 GO:0003700|GO:0006355
Vimu8g00673 113 MobiDBLite consensus disorder prediction 72 113 - -
Vimu8g00673 113 SUPERFAMILY Leucine zipper domain 1 46 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00673 Vimu-Chr8 13483775 13485559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00673 1 85 bZIP Transcription Factor Family AT3G30530 77.647 2.17e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu8g00673 bZIP_1 1.4e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00673 - - aprc:113867865 179.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g00673 8 13483775 13485559 Vimu6g01100 6 11484718 11486474 PCT