Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vimu8g00667 | ATGACAATGCCCTTTCTTACGAAGTTTAACAGCATAGAGATGCTTCTCAATGCATCGAACTCTGTTAGTGCATCTAATAAAAGATGGCACTCTGCATTCATGGCCATCTACTGCTCCCGAGCTATCATGTCACTCTCCGCTCGAAACAAAACATACAAAATCAAAGAAAAAGTCTCACCTACACCAACACCACCGCCATATTTCGTCATGGTTGATTTGAGCCCTCACCGTTCCTTTGGTATCGACCAAACAGTCCTCACTGATATTGTCAAAGATAAAGACCTTAAGAGCCTTGATACATTTGGTGGAGTTGAAGGGGTGGCAACAGCCCTTGAAACCCACCTCGAGTATGGTATCAAAGGTGGTAGTGGTGGTGATGAAGACATCACACGTAGAACACACGTGTTTGGTTCCAACACTTACCACAAACCACCTTCCAAAGGGTTCTTCCACTTTGTGGTGGAAGCCTTTAAGGATGTCACCATTCTCATCCTTTTGGCTTGTGCTGCTCTTTCCCTTGGCTTTGGCATCAAGGAACATGGAATCAAAGAAGGTTGGTACGATGGTGGAAGCATCTTCGTTGCAGTGTTCATTGTGGTTTCCTTGTCAGCAGTGAGCAACTTCAGACAGAACAGACAGTTTGACAAGCTGTCCCAGGTGAGCAATGACATACAAATTGATGTGGTGAGAAGTGGGAGGCGTCAGCATTTGTCAATCTTTGAAATAGTTGTCGGTGATGTCATTTGCTTGAAGATTGGGGATCAAGTGCCAGCAGATGGGTTGTTCATTGAAGGGCATTCACTTAGAGTGGATGAATCAAGCATGACAGGAGAGAGTGATCATGTTGAGATTAGTAGACAGCACCCTTTTTTGTTCTCAGGCACCAAGGTGGCTGATGGGTATGCGAAGATGCTCGTTACCTCTGTTGGTATGAACACAACATGGGGCCAAATGATGAGTTCGATAAGCCGGGATAATGATGAGCAAACTCCTTTGCAAGAGAGGCTAAACAAGCTAACATCGTCCATTGGAAAGGTTGGTTTGGCTGTGGCTTTTCTTGTCCTTGTTGTTTTGTTGGTTAGATACTTCACAGGGAACACGAAGGATGACAATGGGGTCAGAGAGTACAATGGAAGCAAGACCAAGTTTGATGATATAATGAATGCTGTTGTGGGAATTGTTGCTGATGCAGTTACCATTGTTGTTGTTGCAATCCCCGAGGGTCTTCCATTGGCTGTGACGCTCACTCTGGCTTATTCAATGAAGAAAATGATGGCTGACCAAGCAATGGTGAGAAAGCTCTCAGCATGTGAGACAATGGGTTCTGCCACCACAATTTGCACTGATAAGACTGGGACTCTCACACTCAATGAGATGAAAGTAACCAAGTTCTGGATTGGCCAAGAACCCGTGGCAGAAACTGAAAATGCCAACTCAAAGGTTGCTCCAATTGTTCTTCAACTTATCCAAGAAGGGGTGGCTCTAAACACAACTGGTAGTGTGCACAAGTCCAATAAATCAGGTTCTGAATTTGAGTTTTCAGGCAGTCCCACAGAAAAAGCCATCCTGTCGTGGGCAGTTTTGGAATTGAACATGGAGATGGAGCACTTGACAAAAAGCTGTTCCATCATTCAGGTTGAGACCTTCAACTCAAAGAAGAAGAAAAGCGGAGTTTTGTTGAGAAGGAAGGCAGACAACACAGTTAATGCTCACTGGAAAGGAGCAGCTGAGATGGTACTAAAGATGTGCTCAAGATACTATGATGCTTCTGGTACTGTGAAAGATCTTGACATTGATACAATGTTGAAGTTTGAACACATCATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATTGCTTTTGCACATGTAGAAGTACCCGAGGAAGAGCTTGGAGATGAAAACACAACGGGGAAAGTGAAAGACAGTGGTTTAACATTGTTAGGGGTGGTTGGGATTAAGGATCCATGTCGTCCAGGGGTGAAGAAGGCTGTGGAAGCTTGCCAAAAGGCTGGTGTGAACGTCAAAATGATCACAGGCGACAATGTTTTCACTGCAAGGGCTATAGCAAGCGAATGTGGGATACTCCAGGCAAATCAGGACACCGCTGGAGCAGTGATTGAAGGAGAGGAATTTCGCAACTACACACATGAAGAGAGGCTGGAGAAGGTGGAAAATATCTGTGTGATGGCCAGATCTTCTCCTTTTGACAAACTTCTAATGGTTCAATGTCTGAAGCAGAAAGGCCATGTAGTTGCTGTTACCGGGGATGGCACAAATGATGCACCAGCACTCAAAGAAGCTGACATTGGACTATCTATGGGAATTCAAGGTACTGAAGTGGCCAAAGAGAGCTCAGACATTGTTATTTTGGATGACAATTTTGCATCTGTGGTTACTGTCTTAAGGTGGGGAAGGTGTGTTTACAACAACATACAGAAGTTCATTCAATTTCAGTTGACAGTGAATGTTGCAGCACTTGCTATCAACTTTGTGGCAGCAGTATCAGCAGGGGAAGTGCCACTCACAGCAGTACAATTATTATGGGTGAACTTGATCATGGACACATTAGGTGCTTTGGCACTTGCAACAGAAAAGCCCACCAATGAATTGATGGACAAACCACCAGTTGGTAGAACAAAACCTCTAATCACCAATGTCATGTGGAGGAATCTATTGGCTCAAGCTTTGTACCAGATAGCAGTTTTGCTGACTCTTCAATTCAAAGGTGAGTCTATCTTTGGTGTGACATCAGGGGTAAATGACACATTGATTTTCAACACATTTGTTCTCTGCCAAGTGTTCAATGAGTTCAATGCAAGGAAGATGGAGAAGAGGAATGTATTCAAAGGCATACACAGGAGCAAGTTGTTTTTAGGCATCATTGCCATAACAATAATCCTTCAGGTTGTTATGGTTGAGTTTCTAAAGAAATTTGCTGACACAGAGAGGCTAAATTGGGGGCAATGGGCTATCTGCATTGCTCTAGCTGCAGTTTCCTGGCCAATAGGTTGGGTTGTGAAGTTGATACCTGTCCCAGAGAAACCATTTCTCAATTTTTTGAGAATCAAGAAATGA | 3078 | 0.4389 | MTMPFLTKFNSIEMLLNASNSVSASNKRWHSAFMAIYCSRAIMSLSARNKTYKIKEKVSPTPTPPPYFVMVDLSPHRSFGIDQTVLTDIVKDKDLKSLDTFGGVEGVATALETHLEYGIKGGSGGDEDITRRTHVFGSNTYHKPPSKGFFHFVVEAFKDVTILILLACAALSLGFGIKEHGIKEGWYDGGSIFVAVFIVVSLSAVSNFRQNRQFDKLSQVSNDIQIDVVRSGRRQHLSIFEIVVGDVICLKIGDQVPADGLFIEGHSLRVDESSMTGESDHVEISRQHPFLFSGTKVADGYAKMLVTSVGMNTTWGQMMSSISRDNDEQTPLQERLNKLTSSIGKVGLAVAFLVLVVLLVRYFTGNTKDDNGVREYNGSKTKFDDIMNAVVGIVADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNEMKVTKFWIGQEPVAETENANSKVAPIVLQLIQEGVALNTTGSVHKSNKSGSEFEFSGSPTEKAILSWAVLELNMEMEHLTKSCSIIQVETFNSKKKKSGVLLRRKADNTVNAHWKGAAEMVLKMCSRYYDASGTVKDLDIDTMLKFEHIIQGMAASSLRCIAFAHVEVPEEELGDENTTGKVKDSGLTLLGVVGIKDPCRPGVKKAVEACQKAGVNVKMITGDNVFTARAIASECGILQANQDTAGAVIEGEEFRNYTHEERLEKVENICVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVLRWGRCVYNNIQKFIQFQLTVNVAALAINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTNELMDKPPVGRTKPLITNVMWRNLLAQALYQIAVLLTLQFKGESIFGVTSGVNDTLIFNTFVLCQVFNEFNARKMEKRNVFKGIHRSKLFLGIIAITIILQVVMVEFLKKFADTERLNWGQWAICIALAAVSWPIGWVVKLIPVPEKPFLNFLRIKK | 1025 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vimu8g00667 | 1025 | FunFam | Calcium-transporting ATPase | 457 | 656 | - | - | |
| Vimu8g00667 | 1025 | SFLD | p-type atpase | 429 | 808 | IPR044492 | - | |
| Vimu8g00667 | 1025 | Gene3D | - | 444 | 800 | IPR023214 | - | |
| Vimu8g00667 | 1025 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 93 | 1012 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
| Vimu8g00667 | 1025 | FunFam | Calcium-transporting ATPase | 199 | 323 | - | - | |
| Vimu8g00667 | 1025 | Gene3D | - | 127 | 323 | - | - | |
| Vimu8g00667 | 1025 | Pfam | Cation transporting ATPase, C-terminus | 840 | 1010 | IPR006068 | - | |
| Vimu8g00667 | 1025 | Gene3D | - | 457 | 656 | IPR023299 | GO:0000166 | |
| Vimu8g00667 | 1025 | SUPERFAMILY | HAD-like | 445 | 860 | IPR036412 | - | |
| Vimu8g00667 | 1025 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 449 | 455 | IPR018303 | - |
Showing 1 to 10 of 34 entries
Duplication type information
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vimu8g00667 | K01537 | - | gmx:100793918 | 1743.78 |
Showing 1 to 1 of 1 entries