Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00647 GATGAGCAAATAAAGGCGGTGAAGCTAGCATTGCACTTGTCCACTGCGCCGTCTTCGGTTGTGTGCCGTGAGGAGGAGCAGAATGTTGTTTTGGAGTTCTGCAAAGGTAAAAATTGGGATACACGACCTGCGGCTGCTCATGCAATTGGATCAATTGGGATACAGAAAATGCACACCCACCTAATTCCTGATAAGACGCCCAGGTCCATTTTTGTATACTTCCGAGGACTTTTTTATGATGTTGGCAATGACCCTGAAGGTGGTTACTATGCAAGATTGGTAGAGGCTGTGATATTTGGTTGCATACCTATTATTATTGCAGATGACATTGTGCTGCCATTTGCTGATGCAATCCCATGGGAAGATATAGGAGTGTTTGTTGCTGAGGAGGAGCCTGCTCAACCTGGAGATGCCTTCCATCAAGTTTTAAATGGACTGGCAAAGAAGCTGCCACATGACAACTCCGTGTTCTTGAAACCAGGGGAGAAGATCTTGAATTGGACTGCTGGACTGTGGCTGACCTTAAACCTTGAATCAGAACAAGGTTCCAACCTCAATGAGATGGAGACAACGGATTCTGTGACTGTGATGATATTAGATGTGCTTCCTTTGATGATTTTGTATGTGGCTGGATTGAAGGATATTTTGAAGCCAGATTTCCTCTGGGATAATGTATTCGAGCCTTTTCCGATTGAATTTTTTGTCATTTCCTCATATAACTTTGTTTGCTGCAGCTGGAGGTTACTCAAGGATTTTGTGACCCTAACCCTACAGAATATGTTGATAGTGAGAAAACAGAGCCAAATGTTCTCCTGGGAGGATGTCCATCCTGTTAGCTTCTCAGCTGCCAAATTGATGTCAAGTAAAGGAATCCGCTCTTCCATATTGGTTTGTTTGCAATGTATCACCAGTTCCAGTGAGGATTATAGTGGCTAG 936 0.437 DEQIKAVKLALHLSTAPSSVVCREEEQNVVLEFCKGKNWDTRPAAAHAIGSIGIQKMHTHLIPDKTPRSIFVYFRGLFYDVGNDPEGGYYARLVEAVIFGCIPIIIADDIVLPFADAIPWEDIGVFVAEEEPAQPGDAFHQVLNGLAKKLPHDNSVFLKPGEKILNWTAGLWLTLNLESEQGSNLNEMETTDSVTVMILDVLPLMILYVAGLKDILKPDFLWDNVFEPFPIEFFVISSYNFVCCSWRLLKDFVTLTLQNMLIVRKQSQMFSWEDVHPVSFSAAKLMSSKGIRSSILVCLQCITSSSEDYSG 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00647 311 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 89 135 IPR004263 GO:0006486|GO:0016757
Vimu8g00647 311 Pfam Exostosin family 91 136 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00647 Vimu-Chr8 13106704 13110970 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00647 1 56 Core DNA Replication Machinery Family AT2G29680 51.786 9.69e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00647 K20870 - gmx:100812747 197.208