Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00633 ATGGGTAAGGGAAAGGTTCATATCAACATTGTGGTCATTGGACATGTCGACTTTGGGAAGTCAACTACCACTGGTCATTTGATCTACAAGATTGGTGGTATTGGTACCGTGCCAGTTGGATGTGTTGAGACCGGTGTCTTGAAACCTGGTATGGTGGTGACTTTTGCTCCAACTGGTTTGACAACTGAAGTTAATAAAGATAAGATTTTTGTGGATGATTCTGACCTAGCTGAGAGTGGAAAAAAAGACCCACTTGTTAGAAGGCAGGAGCTATTGATTAAGAGTGGACTTGCAGATAGTCTTCTTGATGCCCAACTTAGAGAGGTGACATTGACGGAAGAGAATGCAGCATATGAAAATGCAATATCCGATTTTGAGAATAAAATAAAAGAGAAATTACAAGAGGCTGATTTACTAAGGACAAAGTTGCAGGAGATGGATGAGACTGAGAAGAAACTCAAAGCTGAGCTGGACAATATGAAACAGCAAGCATCTGGTGGTTGGGATGAAATGAAGGCAAAATCTAAAGCTGGATTTGATGCAGATGCAGAAGCATCGAGATCAGCTTTACTAGATGAATTGGAAGAGAAGAAGAAGCAGTTGGATGCTGTGAAAGAGTTGGAGAAGAAATGGGCAAAAGTGCAGGAAAATGCACTTAAACAACCTTCCCCAGCACAAAGAGAGAAGACATTAGATAAACAACTTCATGGTCTAATTGAGCAACTGGCTGCTAAACAGGCACAAGCTGAGGGCTTACTGGGTGACATTCATTTGAAAGAGATGGAATTGGAAAGATTGAATGGGCTATGGCGGCAAACAGAAAACAGCAATTTGGAGGCAAACACTGCTGCTAGGTATCGTTTCAGTAAAAGCTCTTCAGATAAGTTACACAGTATGTCAGATTATGAAGGCCATCAAAGGCTTCCTTATCACTCTGCTGGCAGATCTGAAACCCAGCAGAGGCTTATGCTATTCAGGTCTGCATTTGTGCTCTATATTTTAGCTTTACATATATTAGTCTTTATCAGGATATCATTTTAA 1041 0.4083 MGKGKVHINIVVIGHVDFGKSTTTGHLIYKIGGIGTVPVGCVETGVLKPGMVVTFAPTGLTTEVNKDKIFVDDSDLAESGKKDPLVRRQELLIKSGLADSLLDAQLREVTLTEENAAYENAISDFENKIKEKLQEADLLRTKLQEMDETEKKLKAELDNMKQQASGGWDEMKAKSKAGFDADAEASRSALLDELEEKKKQLDAVKELEKKWAKVQENALKQPSPAQREKTLDKQLHGLIEQLAAKQAQAEGLLGDIHLKEMELERLNGLWRQTENSNLEANTAARYRFSKSSSDKLHSMSDYEGHQRLPYHSAGRSETQQRLMLFRSAFVLYILALHILVFIRISF 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00633 346 Coils Coil 108 163 - -
Vimu8g00633 346 SUPERFAMILY Translation proteins 28 80 IPR009000 -
Vimu8g00633 346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 38 IPR027417 -
Vimu8g00633 346 Gene3D Translation factors 26 85 - -
Vimu8g00633 346 Coils Coil 187 217 - -
Vimu8g00633 346 Pfam Elongation factor Tu GTP binding domain 6 35 IPR000795 GO:0003924|GO:0005525
Vimu8g00633 346 PANTHER OS09G0108400 PROTEIN 103 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00633 Vimu-Chr8 12926495 12932627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00633 28 64 Eukaryotic Initiation Factors Gene Family AT5G60390 89.189 5.54e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00633 - - gmx:100818761 331.257