Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00619 ATGAGTGTAACATGGACTTACATCATTGCTGAGGAACTTGTTTCTCTCTTGGTTGCACTTGGGAATGTGATAGGAGTTAGTCCTTCAATCCTTGGACTAACTGTCCTAGCTTGGGGTAATTCTCTAGGAGATTTGATAGCCAATGGTGCAATGGCCAAGAATGGAGGAGCTGATGGGGCCCAAATAGCTGTCTCTGGTTGTTATGCAGGCCCTATGTTTAACATTTTGATGGGCTTGGGCTTACCTCTTCTACTCTCAGCATGGTCTGAATACCCAGAGTCTTATGTGATTCCCAAGGACCCTTCTCTTTTTGCAACACTTTTGTTCTTGATGGGAGGGGTGCTTTGGGCCCTTGTGATATTGACAAAGAAGAATATGAAGCTTGATAAGTCATTGGGAATTGGGCTCTTGACCATTTACCTCTGCTTTTTGTTTATAAGGATGGTCATTGCAATTGGTGTTATTAAATTCTAG 474 0.4283 MSVTWTYIIAEELVSLLVALGNVIGVSPSILGLTVLAWGNSLGDLIANGAMAKNGGADGAQIAVSGCYAGPMFNILMGLGLPLLLSAWSEYPESYVIPKDPSLFATLLFLMGGVLWALVILTKKNMKLDKSLGIGLLTIYLCFLFIRMVIAIGVIKF 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00619 157 Gene3D - 2 150 IPR044880 -
Vimu8g00619 157 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 156 - -
Vimu8g00619 157 Pfam Sodium/calcium exchanger protein 1 148 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00619 Vimu-Chr8 12771408 12772315 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00619 1 156 Antiporters AT5G17860 66.667 3.55e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00619 K13754 - gmx:100818583 288.5