Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00592 ATGGGATCTCAAGGTGGGGCAGTTCAAGAGGCAAACACTACTACCCCTTTGGTTAGGCAAGGATCCTTGTACAATCTGACCCTAGATGAGGTGCATAACCAGATTGGGAATTTGGGGAAGCCACTTGGCTGCATGAATCTTGATGAGTTGCTGAAGAGTGTGTGGAGTGCTGACATGCAGGATGGCCAAGCTGCTTCAGATTCCTCTCTGAATCCTCAGGGCAGTCTAACTTTGTCAAGGGATCTTAGCAGGAAAACTGTTGATGAGGTGTGGAGAGATATGCAACTGAAGAAGGATGAGAAAACCCAGAAAAGAAAGCCTACACTTGGTGAGATGACTCTGGAGGACTTCTTGGTGAAAGCTGGAGTGTTTGCTGATTCAAATGGAGATTCCTCACAGCATGGTCATTGGATGCAATACCAGCATTCTTCAGTGCAACATCAGAATATGGTTGGGGGTTATGTGGCTGGCCATGCCATTCAGCAGCCTTTTGTTCTTGATGCATCATACTCTGAGCCAGCTTCTGTAATAGGAGCTTTATCTGATACACAAACTCCCTGTCGAAAAAGGCTTGCCTCTGGTGATGTGGTAGAGAAAACTGTGGAGAGGAGGCACAAGAGAATGATTAAAAACAGAGAATCTGCTGCTAGATCTCGGGCAAGAAGACAGGCATACACACAAGAACTGGAGATTAAAGTTAAGCAGTTAGAAGAGGAGAATGAAAGGCTTAGAAGACTGAATGAGATTGAGAAGGCATTGCCATCTGTACCACCACCTGAGCCTAAACAACAGCTTCGCAGAACTAGTTCAGCCATCTTTTGA 822 0.4574 MGSQGGAVQEANTTTPLVRQGSLYNLTLDEVHNQIGNLGKPLGCMNLDELLKSVWSADMQDGQAASDSSLNPQGSLTLSRDLSRKTVDEVWRDMQLKKDEKTQKRKPTLGEMTLEDFLVKAGVFADSNGDSSQHGHWMQYQHSSVQHQNMVGGYVAGHAIQQPFVLDASYSEPASVIGALSDTQTPCRKRLASGDVVEKTVERRHKRMIKNRESAARSRARRQAYTQELEIKVKQLEEENERLRRLNEIEKALPSVPPPEPKQQLRRTSSAIF 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00592 273 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 206 221 IPR004827 GO:0003700|GO:0006355
Vimu8g00592 273 Gene3D - 201 253 - -
Vimu8g00592 273 MobiDBLite consensus disorder prediction 249 273 - -
Vimu8g00592 273 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 201 253 - -
Vimu8g00592 273 Coils Coil 219 253 - -
Vimu8g00592 273 SMART brlzneu 199 267 IPR004827 GO:0003700|GO:0006355
Vimu8g00592 273 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 201 245 IPR004827 GO:0003700|GO:0006355
Vimu8g00592 273 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 18 271 IPR043452 GO:0003700|GO:0045893
Vimu8g00592 273 SUPERFAMILY Leucine zipper domain 203 248 IPR046347 GO:0003700|GO:0006355
Vimu8g00592 273 Pfam bZIP transcription factor 203 248 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00592 Vimu-Chr8 12443092 12448806 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00592 1 273 bZIP Transcription Factor Family AT3G56850 55.853 7.78e-96 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu8g00592 bZIP_1 3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00592 K14432 - gmx:100170741 402.519