Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00528 ATGGGAAGACAACCTTGTTGTGATAAGGCTGGTTTGAAGAGAGGTCCATGGACTATTGAGGAAGATCACAAGCTTATGAATTTCATTCTCAACAATGGTATTCACTGCTGGAGAGCAGTTCCCAAGCTAGCAGGTATTATTTCCTTTGTGAAAAACTTGTTTACTTGTTGTGACTTTGCCTTAAAGTTGTGTTATTTGAATTCTGCATTCTTCCTTTTTCTTTCTGTTTGGCATTGTGGTGAAGGATTGTTGAGATGTGGAAAGAGCTGCAGATTGAGATGGATTAATTATCTGAGACCAGACCTCAAGAGAGGTGGATTTACTGAAATGGAAGAGGATCAAATTATACAACTACATTCATGTCTTGGTAACAGGTGTCTATGTTACATGTTTCTGTATTTTCTTTGCAGGAAAAATTTATGGCATGGTTTTTGGACAGTGTATTTGAAAAACCTTAGCTCTGTCTACATTGACTAG 477 0.3753 MGRQPCCDKAGLKRGPWTIEEDHKLMNFILNNGIHCWRAVPKLAGIISFVKNLFTCCDFALKLCYLNSAFFLFLSVWHCGEGLLRCGKSCRLRWINYLRPDLKRGGFTEMEEDQIIQLHSCLGNRCLCYMFLYFLCRKNLWHGFWTVYLKNLSSVYID 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00528 158 Gene3D - 11 104 - -
Vimu8g00528 158 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 125 - -
Vimu8g00528 158 SUPERFAMILY Homeodomain-like 85 125 IPR009057 -
Vimu8g00528 158 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 102 IPR017930 -
Vimu8g00528 158 ProSiteProfiles Myb-like domain profile. 9 98 IPR001005 -
Vimu8g00528 158 SUPERFAMILY Homeodomain-like 8 47 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00528 Vimu-Chr8 11608478 11608954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00528 2 125 MYB Transcription Factor Family AT1G79180 54.400 6.86e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00528 K09422 - gmx:100819471 174.866