Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00524 ATGCTAGTATGTGTTCTTCTTGGTGCGAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGGAAAGCTGTAGAAGCAGGTTCACTTCTGGAGCCGGTCAAGGTGGTGGCACAGGTCCTGATGTATCCATTTTTTATTGGAAGTGTGCCCACTCATTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTATGCTAGCATGGAAACTATTTCTACCAGAGGGGGAGTTTAACCTAGACCATCCAGCTGCCAATCCCCTTGTCCCAGGGCAGGGACCTCCTTTAAAGCAGAGACCTCCAACATTGACAGTGGTGGCAGAACACGACTGGATGAGGGACCGTGCCATTGCATATTCAGAGGAGCTTAGGAAGGTGAATGTTGATGCACCTGTTTATGAGTATAAAGATGCAGTCCATGAATTTGCAACACTTGACATCCTTATCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATTGCCATCTGGGTCAAGAAATATATTTCCCTTCGAGGTCACGAATTCTCATATTGA 546 0.4615 MLVCVLLGASCGANIADYVARKAVEAGSLLEPVKVVAQVLMYPFFIGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEGEFNLDHPAANPLVPGQGPPLKQRPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVYEYKDAVHEFATLDILIKSPQAQVCAEDIAIWVKKYISLRGHEFSY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00524 181 Gene3D alpha/beta hydrolase 4 176 IPR029058 -
Vimu8g00524 181 Pfam alpha/beta hydrolase fold 4 146 IPR013094 GO:0016787
Vimu8g00524 181 SUPERFAMILY alpha/beta-Hydrolases 5 172 IPR029058 -
Vimu8g00524 181 PANTHER ARYLACETAMIDE DEACETYLASE 4 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00524 Vimu-Chr8 11554422 11555684 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00524 4 181 Carbohydrate Esterase AT3G27320 85.955 4.53e-112 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00524 - - gmx:100809142 344.354