Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00523 ATGCCGACCGTGGCCGTGAAACTCTACAGCGTCTTCTTCAAGTTTCTCCTAAAGAACCGTTTGCAGAACCAGATCCATGCCCCGTCCGAAGAATCCAATCAGTTCGGTGTTACGACCCGACCCGACGAGTCCGTCGCCGCCGCCAACCCCTCCTTCTCCGACGGCATCGCCACCAAAGATATCCACATCGATCCCGTCACCTCCCTCTCCGTCCGAATCTTCCTCCCCGATTCCGCACTCTCTCCCGAACCCAAATCCAAAACTATCTACAAATCCGAACCTGGATCCGCGGGAAACCTTGAGACGGCATCGTCGCGCGCGGTGCGGCGAAATAGCTACGAGCCCTCAGTGTTTACGCCGCGGGAGGAGTCGAGGCGGAGCAGCGCCGGGGAGTACCGGGGGTACTTGCCGGCGGCGGACGGGCGCCGGAAAAAGTTACCGGTGGTGTTACAGTTCCACGGCGGGGGCTGGGTGAGCGGGAGCAATGATTCAGTGGCGAACGATATGTTCTGCCGGAGGATTGCGAAACTCTGCGATGCGGTGGTGGTCGCGGTCGGCTACCGGCTGGCGCCGGAGAATCGGTTTCCGGCGGCGTTTGAGGACGGGGTGAAGGTTCTGAATTGGCTGGCGAAGCAGGCAAATTTGGCGGAGTGTAGTAAGTCGTTGGGAGGGAGGAAATCGGAGGGTCATCATAAGCATATTGTTGATTCTTTTGGAGCGTCAGTAGTTGAGCCTTGGTTGGCTGCTCATGCAAATCCATCAAGGTTGAAACTCACTCTAAACTTACTCTTTTGTAGATTGATCTGTTCGTACATTTTATAG 822 0.5657 MPTVAVKLYSVFFKFLLKNRLQNQIHAPSEESNQFGVTTRPDESVAAANPSFSDGIATKDIHIDPVTSLSVRIFLPDSALSPEPKSKTIYKSEPGSAGNLETASSRAVRRNSYEPSVFTPREESRRSSAGEYRGYLPAADGRRKKLPVVLQFHGGGWVSGSNDSVANDMFCRRIAKLCDAVVVAVGYRLAPENRFPAAFEDGVKVLNWLAKQANLAECSKSLGGRKSEGHHKHIVDSFGASVVEPWLAAHANPSRLKLTLNLLFCRLICSYIL 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00523 273 MobiDBLite consensus disorder prediction 31 46 - -
Vimu8g00523 273 Pfam alpha/beta hydrolase fold 149 256 IPR013094 GO:0016787
Vimu8g00523 273 Gene3D alpha/beta hydrolase 8 241 IPR029058 -
Vimu8g00523 273 MobiDBLite consensus disorder prediction 82 125 - -
Vimu8g00523 273 MobiDBLite consensus disorder prediction 31 51 - -
Vimu8g00523 273 PANTHER ARYLACETAMIDE DEACETYLASE 53 219 - -
Vimu8g00523 273 SUPERFAMILY alpha/beta-Hydrolases 133 213 IPR029058 -
Vimu8g00523 273 MobiDBLite consensus disorder prediction 92 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00523 Vimu-Chr8 11551928 11552749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00523 1 258 Carbohydrate Esterase AT5G14310 62.989 1.09e-111 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00523 - - gmx:100794631 407.142