Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00509 ATGATTGAAAATAACTGTAATCACCCACTACTCCCATTTCTCGTCCAACTCACTCAAATCCAACTTCGCCACTCTCTCGATCTACATCTATATATAAGAAACCCTTTTTTCCACATTTCCTACTACACCAAAGTGTGCTATTTCTACCACAAACTTCTGCATTCACTCTCCTCTTGCCTCATACTTTCAATGGCTTCTTCTTCTTCCACTTCCCTATTAGTGCTTCTCTTTGCCATTTTTTCCACTCTTACATGTTGCTCTGTGGCTTCCAATGAATTCCAAGTTGGTGACTCAAATGGGTGGGTTGTTCCTCCCCAAAATGACACCAACTTCTACAATGAATGGGCTTCCCACAACAGGTTCCACGCTGGTGACACCCTCTGGTTTAAGTACAAGAAGGATTCTGTGATGGAGGTGGATGAGGGGGATTACACACACTGCAATGCCACACACCCCAAACTCTTCTCCAACAGTGGCAACACCAAGTTGAAGCTTGGTCACCCAGGGACCTTCTACTTCATGAGCGGTGCTTCAGGGCACTGTGAGGTAGGACAGAAGATGATTGTGAGGGTCATGGTGGATGAGTCTCTTCCTCAACATGCCAAGTCTTCTGGTTACCATATTGCAATATCTCCAACTGGGCTGTCTCAAGTGCTCTTCTTTCAGTTTCTTTTGGCATGTTTCTTAGGTAGTTTGAGTAATTAG 705 0.4454 MIENNCNHPLLPFLVQLTQIQLRHSLDLHLYIRNPFFHISYYTKVCYFYHKLLHSLSSCLILSMASSSSTSLLVLLFAIFSTLTCCSVASNEFQVGDSNGWVVPPQNDTNFYNEWASHNRFHAGDTLWFKYKKDSVMEVDEGDYTHCNATHPKLFSNSGNTKLKLGHPGTFYFMSGASGHCEVGQKMIVRVMVDESLPQHAKSSGYHIAISPTGLSQVLFFQFLLACFLGSLSN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00509 234 ProSiteProfiles Phytocyanin domain profile. 91 193 IPR003245 GO:0009055
Vimu8g00509 234 SUPERFAMILY Cupredoxins 91 192 IPR008972 -
Vimu8g00509 234 Gene3D - 89 196 IPR008972 -
Vimu8g00509 234 PANTHER BLUE COPPER PROTEIN 82 198 IPR039391 GO:0009055
Vimu8g00509 234 CDD OsENODL1_like 92 192 IPR041846 -
Vimu8g00509 234 FunFam Early nodulin-like protein 1 90 196 - -
Vimu8g00509 234 Pfam Plastocyanin-like domain 107 185 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00509 Vimu-Chr8 11405441 11406502 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00509 67 192 Phytocyanin Superfamily AT3G18590 52.756 2.47e-43 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00509 - - vra:106766138 450.669