Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vimu8g00390 | ATGCCAAAAACTCCTCTGTCTGTAATGGGAAATAGGGTTCCTCTCTCGGTGCTTCTGGTTTTGGTAACAGATTTACTTTCAATCTTTCACTCGGAGCAACTGCAATCCTCTCACTCGCAGACCTTCCTAAGAATTCAACGGCAATTGAACTTTCCAGCTGTTTTAAGCAGCTGGAACAACAACACAGACTTTTGCAGCACAGATTCAACATCTTCTCTCACTGTTGTTTGCTATGATGGCACCATAACCCAGCTGCACATTGTTGGTGAAACAACAGCTCCACTTCTTGCTAAAAATTTCTCAATAAATTCCTTTTTCACAACACTGGTTAGGCTTCCCAGTCTCAAAGTCCTCACTTTGGTTTCTCTTGGCATATGGGGTCCATTGCCTGGTAAGATTTCTCAGTTGTCATCACTGGAAATTTTCAATGCCAGTTCAAATTTCTTATATGGTTCCATCCCTCCAGAATTATCCTTACTGTCACATCTCCAAACACTCATTCTAGATTACAACATGTTTTCTGGCCATCTTCCTGAATGGTTTGATTCCTTTCCAGCCTTAACTGTGCTAAGTTTGAAACACAACTTGTTCAATGGTTCACTTCCGGATTCACTGAGTAGCTTGGAGAATATGAGAATTCTTTCACTTTCTCATAACCACTTTTATGGACCAGTGCCTGATTTGCACCGTTTGACGAATCTCCAAGTGCTGGAATTGGATGATAATGGTTTTGGACCCCGGTTTCCCCTGCTTGGTGACAAACTAGTTACTCTAGTACTAAGAAACAACAAGTTCAGGTCTAGCATCCCTGATGAAATCAGCTCATGTTATCAACTTGAGAGACTTGACATCTCAGCAAACACATTTGTTGGACCATTTCAACTAGCACTGATGTCACTCCCTTCTATTACTTATCTCAACATTTCTGGGAACAAATTAACAGGAATGCTTTTGGAGAATCTGTCTTGCAATTCTGGTCTTCAAGCAGTGGATTTGTCCTCAAATCTTTTGACTGGGATCTTACCAAAATGTTTAATGTCAAATGCCAATGATAGGACTGTCTTGTATGCCAGAAATTGTCTAGAAGAGACAAATCAAAATCAGCATGCACTACCCTTTTGCCACACTGAAGCCATAGCTGTGGGAGTAGTACCTGAGGGAAAGAAGCACAAACGAGTATCTAAGGCAGTTCTCTCCCTTGGGATAGTATGTGGAACTTTTGGAGGAGTAGCAATTATTGCACTGCTTTTTTTTATTATCAGAAGAGGAAATGTCAAAAGAAAAACCAAGAATCCTCCTCCAACAAAATTAATATCCGAGAACGCAGCTTCTGGATATACCTCTAAGTTACTCTCTGATGCAAGGTATATATCTCAAACAATGAAGTTCGGAACAGTTGATCTGCCTCCTTATCGAGCTTTCTCACTAGATGAGATTGTAGCAGCTACAAACAACTTTGACTCGGCTTGTTTTATGGGTGAAGGTTCTCAGGGAAAGATGCACAGAGGTCAACTAAAGGATGGTTTACTTGTTGCCATTAGAAGTGTAAAAATCACCAAAAGCTTCAGCACTCAAGATTTTGTGCATAACATAGAGCAGATATTCAAATACAGGCATCGTCATTTAGTCAGTGTTCTTGGACACTGCTTTGAATGTTATTTGGATGATTCAAGTGTCAGCAGCATATTTATTGTGTTTGAGTATGTTCCTAACGGCACACTCAAGAGCTGGATTTCAGATAGACACTACAGAAAATCACTGACATGGATGCAACGCATAGAAGCTGCTATTGGAGTAGCAAAAGGCATCCAATATTTGCATGCAGGAATTGTACCTGGTGTATATTCAAACAATCTAAAAATCACAGATGTTTTACTTGACCAAAATTTTGTTGCAAAAATCAAAATTTATGACCTGCCTTTGTTATCTCTCATGAGGAAGGTTGGACAAGGTAATCCTTCTAGAGAATTCAAAAGTCCTAGCACTAATAAAAATGTAAAACAGGAAGACGAGTCTGATGTATATGACTTTGGAGTAATCCTGCTGGAACTCATTCTAGGAAGGACAATAAAATCAAGGAATGTGGACACTTTAAAGGATCTGTTGCAAGCAAGCATAACAGCTGATGATGAAGCTAGGAGGAGCATTATAGATCCAGCAGTTCGCAAGGTGTGCTTAGATCAATCGTTGAAGACAATGATGGAAATTTGTGTGAGGTGTCTAGTCAAAGAACCAGCAGAGAGACCCTCTAATGAGGATGTTTTGTGGAATCTGCAATTTGCAGCTCAAGTCCAAGATGCATGG | 2304 | 0.4006 | MPKTPLSVMGNRVPLSVLLVLVTDLLSIFHSEQLQSSHSQTFLRIQRQLNFPAVLSSWNNNTDFCSTDSTSSLTVVCYDGTITQLHIVGETTAPLLAKNFSINSFFTTLVRLPSLKVLTLVSLGIWGPLPGKISQLSSLEIFNASSNFLYGSIPPELSLLSHLQTLILDYNMFSGHLPEWFDSFPALTVLSLKHNLFNGSLPDSLSSLENMRILSLSHNHFYGPVPDLHRLTNLQVLELDDNGFGPRFPLLGDKLVTLVLRNNKFRSSIPDEISSCYQLERLDISANTFVGPFQLALMSLPSITYLNISGNKLTGMLLENLSCNSGLQAVDLSSNLLTGILPKCLMSNANDRTVLYARNCLEETNQNQHALPFCHTEAIAVGVVPEGKKHKRVSKAVLSLGIVCGTFGGVAIIALLFFIIRRGNVKRKTKNPPPTKLISENAASGYTSKLLSDARYISQTMKFGTVDLPPYRAFSLDEIVAATNNFDSACFMGEGSQGKMHRGQLKDGLLVAIRSVKITKSFSTQDFVHNIEQIFKYRHRHLVSVLGHCFECYLDDSSVSSIFIVFEYVPNGTLKSWISDRHYRKSLTWMQRIEAAIGVAKGIQYLHAGIVPGVYSNNLKITDVLLDQNFVAKIKIYDLPLLSLMRKVGQGNPSREFKSPSTNKNVKQEDESDVYDFGVILLELILGRTIKSRNVDTLKDLLQASITADDEARRSIIDPAVRKVCLDQSLKTMMEICVRCLVKEPAERPSNEDVLWNLQFAAQVQDAW | 768 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vimu8g00390 | 768 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 35 | 253 | - | - | |
Vimu8g00390 | 768 | SUPERFAMILY | Protein kinase-like (PK-like) | 466 | 760 | IPR011009 | - | |
Vimu8g00390 | 768 | Gene3D | Ribonuclease Inhibitor | 250 | 368 | IPR032675 | - | |
Vimu8g00390 | 768 | PANTHER | UNNAMED PRODUCT | 97 | 688 | - | - | |
Vimu8g00390 | 768 | Gene3D | Ribonuclease Inhibitor | 35 | 249 | IPR032675 | - | |
Vimu8g00390 | 768 | Pfam | Leucine rich repeat | 254 | 313 | IPR001611 | GO:0005515 | |
Vimu8g00390 | 768 | Pfam | Leucine rich repeat | 161 | 221 | IPR001611 | GO:0005515 | |
Vimu8g00390 | 768 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 569 | 768 | - | - | |
Vimu8g00390 | 768 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 459 | 568 | - | - | |
Vimu8g00390 | 768 | Gene3D | Transferase(Phosphotransferase) domain 1 | 569 | 767 | - | - | |
Vimu8g00390 | 768 | Pfam | Protein tyrosine and serine/threonine kinase | 492 | 755 | IPR001245 | GO:0004672|GO:0006468 | |
Vimu8g00390 | 768 | SUPERFAMILY | L domain-like | 109 | 361 | - | - | |
Vimu8g00390 | 768 | Gene3D | Phosphorylase Kinase; domain 1 | 449 | 568 | - | - | |
Vimu8g00390 | 768 | ProSiteProfiles | Protein kinase domain profile. | 486 | 760 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vimu8g00390 | Vimu-Chr8 | 9381933 | 9386715 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vimu8g00390 | 51 | 768 | Miscellaneous Gene Families | AT3G03770 | 62.379 | 0.0 | 866 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-1 | Vimu8g00390 | PK_Tyr_Ser-Thr | 2.3e-22 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vimu8g00390 | - | - | gmx:100813207 | 1300.03 |