Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00378 ATGGATCCCTCTCGCCGCGCACCGCGCGCCGTGATTGACCCCGTCCCCAAGTTCCGCCAAGTCGGGTTCTTCGCCCCGCCCGAACGCTCTCAATCGGGTCCTCCAAACACGACCCACTCTTCGCCCCCAATCTCCAACTCCCTCTCGCCGGTCATGATCCCGCCGCCGCGCCACCTATCGGACAACCTCCTCATCCACGCGCCCCCCGCCTCATCTCCCCTTCGCGCGGACTCCGGCGGCGGCGGAACCTCCTTCGACAACGCGGACTTGTTCACCGCGCCGCTGTCGCCCGCTTTGCCATCGTCGTCTTACTCCAGCAGGATCGCCGGCGACTTCTACAAGGGAAACGGTGGGAAGGTGGCGGCCTCGTCTTTCCCCCGCGGTGGATTCGACCTGACGGCGATGAAGGCGGCGGCGGCCGCGAGCGTCGTCGTGCCGGCGAGCGAGCTGACCACGGTTTCGGTGGTGAATGATTCCCTAGGGATTCCCGGGAGCAGAGGAGGAGGGTCAGCAGTGGAAGTGAAAGAGCAACCTGCTAGTTCAAAACAGAAACCAAAAACCTCAAAAGCTGAAAGACGTGCCCTTCAAGAAGCTCAAAGAGCTGCCAAGGCTGCAGCAAAAGCTGAAGGAAATAAAGCATCTGGAACTGCAGCCCCAGCAAATGCCAAACCATCTAAAGCTGCAAAGCCTGCTCAGAAAATTGATAATGCAGCTGTTGCAGCATCTGAAAAGAAGGGAGGTGAGATTCCACCAGAAAAGGATAGAAAAAAAGATGCTCCTCAACCACGGATGCAATACGATGACAAGAGCCGAGTGGAGAAAGCTAAACGTCGTGCAGTGGTAAAACAAACTGAAGCTAGGAACAGAGTTGAGTTGTTTAGGCACTTGCCGCAATATGAACATGGGAGTCAGCTTCCAGATCTCGAGGCAAGGTTTTTCCATCTTTCTCCAGTGCACCCAGCTGTTTATAAGGTGGGTTTGCAGTATCTAACTGGAGATATATCTGGTGCCAATGCTCGGTGTATTGCAATGCTTCAAGCATTTCAGGAGGCCATCAAAGACTACAAGGTTCCACAGGAGAAGACTCTTGTGAGGGACTTAACTGCAAAAATTAGTAGTTATGTATCATTTCTTATTGAGTGTCGACCTCTGTCAATCAGCATGGGAAATGCTATTAGGTTTCTCAAAAGTCGGATAGCCAAGTTACCTTTGACCTTGTCTGAATCAGAAGCAAAAGCTTCTCTCCATTCAGATATTGAGCGTTTTATTAGTGAGAAGATTATACTCGCCAACAAAGTGATAGTGAAGCATGCTGTCACCAAAATAAGAGATGGTGATGTTCTTCTAACGTATGGGTCCTCGTCAGCTGTTGAAATGATACTATTACATGCACACGAGTTAGGAAGACAGTTTCGTGTTGTGGTAGTTGACTCTTGTCCAAAGCTTAGAGGGCAACTTTTGCTTCGCAGGCTGGTGGAGAAAGGTCTTAGCTGTACATACACTCATATAAATGCCGTTTCCTATATAATGCATGAAGTTACTCGAGTATTTCTGGGTGCTTCATCAGTTTTATCTAATGGAACAGTATATTCAAGAGTAGGGACTGCATGTGTTGCAATGGTTGCTCATGCATTTCGTGTACCTGTCATAGTATGTTGTGAGGCATATAAATTTCATGAACGGGTACAGCTGGACTCAATATGCTCAAATGAACTTGGTGATCCAGATGTAATTTCAAATGTATTGGGTAGAGAGGATGTCAACCACTTGGATGGCTGGGCCAATATTGAAAATCTGCAACTCTTAAATCTGATTTATGATGCAACACCTTCAGATTATGTTTCAATGATTGTCACAGATTATGGCATGGTAAGTCCTGAAATCTTAAGAGTATTTTTGTCTTTGCTGCTAAAACATGCCTAA 1923 0.4841 MDPSRRAPRAVIDPVPKFRQVGFFAPPERSQSGPPNTTHSSPPISNSLSPVMIPPPRHLSDNLLIHAPPASSPLRADSGGGGTSFDNADLFTAPLSPALPSSSYSSRIAGDFYKGNGGKVAASSFPRGGFDLTAMKAAAAASVVVPASELTTVSVVNDSLGIPGSRGGGSAVEVKEQPASSKQKPKTSKAERRALQEAQRAAKAAAKAEGNKASGTAAPANAKPSKAAKPAQKIDNAAVAASEKKGGEIPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQTEARNRVELFRHLPQYEHGSQLPDLEARFFHLSPVHPAVYKVGLQYLTGDISGANARCIAMLQAFQEAIKDYKVPQEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLTLSESEAKASLHSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGRQFRVVVVDSCPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDVISNVLGREDVNHLDGWANIENLQLLNLIYDATPSDYVSMIVTDYGMVSPEILRVFLSLLLKHA 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00378 640 MobiDBLite consensus disorder prediction 246 281 - -
Vimu8g00378 640 MobiDBLite consensus disorder prediction 30 47 - -
Vimu8g00378 640 SUPERFAMILY NagB/RpiA/CoA transferase-like 317 632 IPR037171 -
Vimu8g00378 640 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 39 633 - -
Vimu8g00378 640 MobiDBLite consensus disorder prediction 155 281 - -
Vimu8g00378 640 Pfam Initiation factor 2 subunit family 334 626 IPR000649 GO:0044237
Vimu8g00378 640 MobiDBLite consensus disorder prediction 179 198 - -
Vimu8g00378 640 Gene3D - 429 634 IPR042529 -
Vimu8g00378 640 MobiDBLite consensus disorder prediction 18 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00378 Vimu-Chr8 9315982 9322703 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00378 4 626 Eukaryotic Initiation Factors Gene Family AT5G38640 65.644 0.0 765
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00378 K03680 - gmx:100775998 1040.02