Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00357 ATGGTAATGGTGATTGTCACAACCCTTTTGGTTATATTTGTGAGTGTGGTGTTGAAGGTTGGCTATGACACCATTTCATGTTACTGGCTCACTCCAATGCGCATAAGGAAGATGATGAAGAAACAAGGTGTGCATGGTCCTAAACCCAGTTTTCTCATTGGCAACATCACAGAAATGACATCTCTTGTTTCAACAGCAGTTTCTCAAGACATGAAAACTATCAGCCATGATATTGTTGGTCGTATTTTGCCACATTTTGTTGTCTGGTCCAACCAATATGGAAAGAGATTCTTGTATTGGAATGGAATAGAACCAAGATTGTGTCTAACAGAAACTGCACTGATAAAGGAATTTCTGTCAAAGTACAACTCCATATCTGGAAAATCATGGCAACAACAACAAGGTACCAAACATTTCATTGGGAAAGGATTGTTGATGGCCAATGGTAAAGATTGGCAATACCAACGTCACATGGTTGCTCCAGCATTCATGGGAGAGAGACTTAAGGGCTATGCTGGGCACATGGTGGAATGCACAAAGGATATGCTTCAATCATTGAAAAATTCATTAGAAAGTGGGCAAAGTGAATTAGAGATTGGAGAGTACTTAACTGAACTCACTGCAGATATTATCTCAAGAACTGAGTTTGGCACAAGCTATAAAAAGGGAAAGCAACTTTTCTTTCTCCTCACACAGCTTCAGGCTCGTTGTGCTCAAGCAACTCGTCATCTTTTCCTTCCTGGAAGCAGGTTTTTTCCCAGCAAGTACAATAGAGAGATAAAGAGTTTGAAGATGGAGGTGGAGAAACTCTTGATGGAGATGATAAAGAGTAGGGAAGATTGTATGGAGAAAGAGAGAAGTAATTCATATGAGAATGATTTATTGTGCATACTCTTGGATGAGATGAAGAAAGAAAGTGGTAGCTTGAATCTTCAACTAGTTATGGATGAATGCAAAACATTTTTCTTTGCTGGTCATGAAACCACTGCTCTCTTACTCACTTGGACAGTCATGTTGCTAGCAACAAATCCACATTGGCAAGACAAAGTCAGAGCTGAGGTCAAACACATTTTCAAAGGGGAAACTCCATCACTTGATAAACTCTCCAAGCTCACTCTGTTACAGATGGTGATAAACGAGGCAATGAGATTGTATCCTCCTGCAACTGTGCTTCCGAGAATGGTTTTCGAAGACATTGAGTTGGGAGAGCTACAAATTCCTAAGGGCTTATCAATTTGGATTCCAGTGTTGGCCATTCACCATAGTGAAGAACTGTGGGGTGAAGATGCAAACGAGTTCAACCCTCAGAGGTTTGCTTCAAAATCATTCATATCTGGTCGCTTCATACCCTTTGGTTCTGGCCCTAGAAACTGTGTTGGACAATCATTTGCCATGATGGAGGCCAAGATCATACTAGCCATGTTCATATCTCAGTTTAGCTTCACCATTTCTCAGAGTTATAAGCATGCACCAGTGCTTCTCCTCACAATTAAACCTAAATATGGTGTTCAAGTTTGTTTGAAGCATTTAGATCCATAA 1539 0.4035 MVMVIVTTLLVIFVSVVLKVGYDTISCYWLTPMRIRKMMKKQGVHGPKPSFLIGNITEMTSLVSTAVSQDMKTISHDIVGRILPHFVVWSNQYGKRFLYWNGIEPRLCLTETALIKEFLSKYNSISGKSWQQQQGTKHFIGKGLLMANGKDWQYQRHMVAPAFMGERLKGYAGHMVECTKDMLQSLKNSLESGQSELEIGEYLTELTADIISRTEFGTSYKKGKQLFFLLTQLQARCAQATRHLFLPGSRFFPSKYNREIKSLKMEVEKLLMEMIKSREDCMEKERSNSYENDLLCILLDEMKKESGSLNLQLVMDECKTFFFAGHETTALLLTWTVMLLATNPHWQDKVRAEVKHIFKGETPSLDKLSKLTLLQMVINEAMRLYPPATVLPRMVFEDIELGELQIPKGLSIWIPVLAIHHSEELWGEDANEFNPQRFASKSFISGRFIPFGSGPRNCVGQSFAMMEAKIILAMFISQFSFTISQSYKHAPVLLLTIKPKYGVQVCLKHLDP 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00357 512 Coils Coil 260 280 - -
Vimu8g00357 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Vimu8g00357 512 SUPERFAMILY Cytochrome P450 77 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 Gene3D Cytochrome P450 28 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS E-class P450 group I signature 206 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 502 - -
Vimu8g00357 512 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS P450 superfamily signature 458 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00357 512 Pfam Cytochrome P450 87 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00357 Vimu-Chr8 8964854 8975067 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00357 1 372 Cytochrome P450 AT5G38450 64.721 1.25e-167 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00357 K10717 - gmx:100812567 889.026