Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00328 ATGACTGCTGATTGGATGCCTGGCCAGCCTAGACCCCCTTATCTTGATGGTTCAGCACCAGGTGACTTTGGATTTGACCCTCTTCGTCTTGGTGAAGTGCCAGAGAATCTTGAGAGGTTCAAAGAATCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTTCCGGAGGCATTGGGCTTAGGAAACTGGGTAAAGGCTCAAGAATGGGCTGCAGTTCCTGGTGGCCAAGCCACCTACCTAGGAAACCCAGTTCCATGGGGCACACTACCCACCATTCTGGTCATTGAATTCCTTGCTATTTCCTTTGTGGAGCACCAAAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCCAAGGACCCTAAAGCATTCCATGAATACAAAGTCAAAGAACTTAAGAATGGTGAGAACCGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTTCAACAATCAGCTTATCCTGGAACTGGACCTTTGGAGAACTTGGCTACTCACTTGGCTGACCCATGGCACAACAACATCGGAAACATCATTATTCCACAATCGATTTTGCCTTGA 615 0.4764 MTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGNPVPWGTLPTILVIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKAFHEYKVKELKNGENRRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGNIIIPQSILP 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00328 204 Pfam Chlorophyll A-B binding protein 12 169 IPR022796 -
Vimu8g00328 204 FunFam Chlorophyll a-b binding protein, chloroplastic 6 195 - -
Vimu8g00328 204 SUPERFAMILY Chlorophyll a-b binding protein 3 198 - -
Vimu8g00328 204 Gene3D Chlorophyll a/b binding protein domain 6 195 - -
Vimu8g00328 204 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 196 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00328 Vimu-Chr8 8569180 8570953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00328 1 156 Chloroplast and Mitochondria Gene Families AT3G54890 87.179 2.17e-99 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00328 K08907 - gmx:100305992 415.616