Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00323 ATGGAAAAGAACTTCAATGTGAATTCTAGCAGTGTTCCTCATAACGAGGAGAACATCAACACTGGCGAAACTATTCAGTTGCCGGTACCGGAATCTGAAGACAAACCCGAATCCGATGTCAAACCTGATGCCGAATCTGATGCGAAACCCGCCACCGAACCCGATCCCAAACCCAACGCCGAACCCGATGCGGAACCCGATACCAAACCGGACGGCGAAACTGAAAATGCCACAGATTCGGAACAAGTTACTGAAAAGGTAGAATCCAAAGAAGAGGAGGAAAAAGAAAAGAAAGAAGAAGAAACGCAAGAAACTGTCGAGGCTGAACCGGAATCTCCGGTTCCGAGTCTCGACAAGGTTTTAGATGAGATTGACCAATTTCTCGTGATATTACAACAAAATGTCGATGCCGAAGAATCAACCCCATTGGAAATCCCTAATTTCATCCCCGTTTTCTTGCATCTGGTGGAACAGAAGATAGTGAAGTACGACACGGGTGAAATGAAATGGAGAGAAACAATTGAAGACGATTCCTCGCTTTTGGGATGCGCGAATCGCATTTCGAGGCTGATGAACCATTTCATTGAGTACTCGCGATCTCACGCAGAGAAAGAACAAGAGGGCGAGGAGAAGGAGAAAGTCCGAATAGACTTCATGATCAACGGCGTCAGCGTGATTCAGCAGCGTGTGATGTCGTTTTTGGAGGACGAGTTCCGTACACTGATGGAAGAATCTAGAAACCCAAATAAACCAGACTCAAAGGGAAAACAACAGGTGGCAGACTCCTTAGAGTCCGAGCCACTCGAAGAAAGTATTCCCGAATTCCCAGGTTTCACGGAGGAAGCCATTGCGAATCTGAACAAAATCGCCAAGGAAATGGTAGCCAGCGGTTACGAAAACGAGTGTTGCCAAGTCTACGCACTTTCACGGAGGCATGCGTTTGAGGACGGCATGAACAAAATTCTCGGGTACGAGAAGCTCAGCATAGACGAGATTCAGAGAATGCAATGGGAAACACTGGAGCGCGAAATCCCCACATGGATCAACACCTGGAAGGAGTGCACCTCTGTATGGTTCCCCGGAGAGCGAAAGCTAGTAGAAATGGTGTTCGGCAACGAAGCTGAAACCGTGGTAAGCCTCATGGGCAACATTTCCCGCTCAATTGTCATTCAGCTGCTTAATTTCGGGGAGAGCATTGCCATGACAAAACGCGCCGGCGAAAAACTCTTCAAACTCTTGGACATGTACGAGACTCTACGAGACGCCATTCCTATAATGGAGACCTTGTTCCCGGATGACATAATGGGGGAAATCAAGACCGAAACGACATCCGCAAAATGTCGTCTCGGCGAGGCAGCGGTGTTAATATTCTGCGACCTGGAGAATTCGATTAAATCGGAGACTGGAAGAACTCCGGTGGCGGGAGGCGCGGTTCATCCTCTGACACGTTATATCATGAACTACCTAAGGTTAGCGTGTGAGTATAAAGATACTTTGGAGGAAGTGTTCAAAGAGCATTCGAAAATCGAGCGTGCGGATTCAACTAGCAGGCCTCGCTACGAAACCGAGGAGAGCAAATCGAAGAACGAGAACAAACACAAAGAGGATGAGTCGCCGTTTGCAGCACAATTAATGCGGGTGATGGAACTTCTGGACTCGAATCTGGAGGGGAAGGCGAAGCTGTACAAGGAGGTTGCATTGAGCTGCATTTTCATGATGAACAATGGAAGGTACATAGTGCAGAAGATAAAAGGTTCTGCGGAGATCTACGAAGTGATGGGAGAAACGTGGTGTCGTAAGAGATCGACGGAGCTGAGGACTTACCACAAGAACTACCAGGTGGAGACGTGGAGCAAGATTCTGAGCTACCTGAGCCCTAAAGGATTAAGCGATCACGGGAAGGTGCAGAAGCCGGTGCTGAAGGAGCGGTTCAAGGCGTTCAACGCAGCATTTGAGGAGATTCACAAGACGCAGAGCATGTGGGTGGTGAGCGATGAACAGCTTCAATCGGAACTTAGGGTTTCCATCTCTGCACTTGTTATTCCTGCCTACAGATCCTTCTTGGGGAGGTTTTCGCAGTATTTGGATCCGGGAAGACAAACCGAGAAGTATGTAAAGTACCAAGCTGAGGATATAGAGACTTACATTGACGATTTGTTCGACGGGAACGCACACGGGCGTCGCTAG 2187 0.4833 MEKNFNVNSSSVPHNEENINTGETIQLPVPESEDKPESDVKPDAESDAKPATEPDPKPNAEPDAEPDTKPDGETENATDSEQVTEKVESKEEEEKEKKEEETQETVEAEPESPVPSLDKVLDEIDQFLVILQQNVDAEESTPLEIPNFIPVFLHLVEQKIVKYDTGEMKWRETIEDDSSLLGCANRISRLMNHFIEYSRSHAEKEQEGEEKEKVRIDFMINGVSVIQQRVMSFLEDEFRTLMEESRNPNKPDSKGKQQVADSLESEPLEESIPEFPGFTEEAIANLNKIAKEMVASGYENECCQVYALSRRHAFEDGMNKILGYEKLSIDEIQRMQWETLEREIPTWINTWKECTSVWFPGERKLVEMVFGNEAETVVSLMGNISRSIVIQLLNFGESIAMTKRAGEKLFKLLDMYETLRDAIPIMETLFPDDIMGEIKTETTSAKCRLGEAAVLIFCDLENSIKSETGRTPVAGGAVHPLTRYIMNYLRLACEYKDTLEEVFKEHSKIERADSTSRPRYETEESKSKNENKHKEDESPFAAQLMRVMELLDSNLEGKAKLYKEVALSCIFMMNNGRYIVQKIKGSAEIYEVMGETWCRKRSTELRTYHKNYQVETWSKILSYLSPKGLSDHGKVQKPVLKERFKAFNAAFEEIHKTQSMWVVSDEQLQSELRVSISALVIPAYRSFLGRFSQYLDPGRQTEKYVKYQAEDIETYIDDLFDGNAHGRR 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00323 728 MobiDBLite consensus disorder prediction 508 538 - -
Vimu8g00323 728 MobiDBLite consensus disorder prediction 1 117 - -
Vimu8g00323 728 FunFam Exocyst subunit Exo70 family protein 164 728 - -
Vimu8g00323 728 Coils Coil 80 109 - -
Vimu8g00323 728 MobiDBLite consensus disorder prediction 1 27 - -
Vimu8g00323 728 MobiDBLite consensus disorder prediction 243 271 - -
Vimu8g00323 728 Gene3D Exocyst complex component Exo70 164 728 - -
Vimu8g00323 728 SUPERFAMILY Cullin repeat-like 176 721 IPR016159 -
Vimu8g00323 728 MobiDBLite consensus disorder prediction 30 104 - -
Vimu8g00323 728 PANTHER EXOCYST COMPLEX PROTEIN EXO70 135 722 IPR004140 GO:0000145|GO:0006887
Vimu8g00323 728 Pfam Exo70 exocyst complex subunit 347 718 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00323 Vimu-Chr8 8535893 8538079 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00323 30 724 EXO70 exocyst subunit family AT5G13990 47.521 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00323 K07195 - gmx:100819960 930.243