Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00287 ATGGCGAAGCTGGAGTACGAGACTGGATCGACCCTCCTAAACACCACGAATAACATAAGGATGGGATACCTTCCTGAACCACTACAAGTTCTTCAAAACGATATTGATTTGCTGAATCCTCCGGTTGAGTTGGAGAAGAGAAAGCACAAGCTCAAACGTCTTGTTCAGTCACCAAATTCTTTCTTCATGGTACATAATCTCTTATTATTAATATTATATTATTGTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTCCACTCTCAGACAGTTGTGGTATGTGGTAACTGCCAGACAGTGTTGTGCCAACCAACAGGGGGAAGAGCGCGGCCGAGCGCTTCCCTCTTTAGTGAGGGGTGGCGTGGTATTCCACGAGAGAGGGTATTCTATGTGGCGCACTCCTTTTAAGCAGTTGAAGCGACAAGATTTGCCCTACATCATAACAAAGTTGCTGCAAATTTCTGCTCAAAAGGCTTATGTTGTCTATAGCTTAGATGTTGAGTCGTAG 528 0.3996 MAKLEYETGSTLLNTTNNIRMGYLPEPLQVLQNDIDLLNPPVELEKRKHKLKRLVQSPNSFFMVHNLLLLILYYCFIIIIIIIIIIIIIIIISTLRQLWYVVTARQCCANQQGEERGRALPSLVRGGVVFHERGYSMWRTPFKQLKRQDLPYIITKLLQISAQKAYVVYSLDVES 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00287 175 PANTHER 40S RIBOSOMAL PROTEIN S27 30 63 IPR000592 GO:0003735|GO:0005840|GO:0006412
Vimu8g00287 175 Gene3D - 33 76 IPR023407 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00287 Vimu-Chr8 8005441 8010672 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00287 30 63 Cytoplasmic Ribosomal Protein Gene Family AT2G45710 97.059 2.77e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00287 K02978 - twl:119990722 70.0922