Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00275 ATGGTCACTCTTTTACACTTCTTTCTCACATTCATGGTTCTTCTCTTCTCTTGGAACTTCTTCTTCAAAACAAGAAGGTTCTGGAACCTTCCTCCAGGGCCCTTCTCCTTCCCCATAATCGGAAACCTCCACCAGATGAGACAGCCGCTCCACCGCACGTTCCACGCCCTTTCTCAGAAACACGGCAAAGTCTTTTCTCTCTGGTTCGGTTCGCGCTTCGTCGTTGTCGTTTCCTCGCTCGAGGCAGTGCAGGAATGCTTCACCAAAAACGACATCGTCTTGGCGAATCGGCCTCGCTTCCTCGCCGGCAAGTACATAGGATACAACAACACCACCGTCGCAGTGTCGCCCTACGGCGACCACTGGCGCAACCTCCGCCGCATCATGTCGCTCGAGGTTCTCTCAACGCACCGTTTGAACTGCTTCTTGGAAATCCGAAGGGACGAGATCATGAGGCTCGTGCGAAAGCTCGCTCACGACTCGCGCAACGGCTTCGCCAAAGTGGAACTCAAATCCAGCTTTTCGGAAATGACTTTTAACACTATAATGAGGATGGTGTCTGGGAAGAGATATTACGGTGAAGATTGTGATGTGAGTGATGTGGAAGAAGCAAAACAATTTCGAGGGATTATTAAAGAGTTGGTGGCTTTGGGAGGGGCAAATAATCCTGGAGACTTCTTGGCTTTGCTGAGGTGGTTTGATTTTGATGATTTGAAGAAGAAGCTGAAGAGAATTAGTAAGAGAACCGATGCCTTTTTACAAGGACTCATCGATGAACATCGTAACAGAAAACAAAGCGCCAATACTATGATAGATCATCTTTTAACACAACAACAATCACAACCTGAGTACTACACGGATGAAATCATCAAAGGACTTGCCCTGGTTATAATAATGGCAGGAACAGACACATCAGCTGTAACTTTGGAATGGGCAATGAGTAATTTATTAAACCATCCAGAGATACTAAAGAAGGCAAAAAGGGAATTAGACACTCATATAGGTCAGAACCGTCTAGTAGATGAAGTTGACATTCCTAAACTTACTTATATTCAAAGCATTGTTAATGAGACACTTCGTCTGCATCCTGCGGCTCCAATGTTGGTACCTCATTTCTCTTCAGAAGATTGCACCATTGGAGATTACAATCTTCCACAGAACACAATTTTGTTAGTGAATGCTTGGGCTATTCACAGAGATCCCAATTTATGGAGTGACCCAACACATTTTAAGCCTGAAAGGTTTGAAAATGAAAGTGAAGTTAACAAGTTGCTTCCTTTTGGGTTAGGGAGAAGGGCTTGTCCTGGATCAAACTTAGCTCAACGCACAGTGACCTTAACTTTGGCTTTATTGATTCAATGTTTTGAATGGAAACGAACCAGTATTGAAGAAATTGATCTGATTGAAGGAAAAGGAATCACTGTAGGAAGAAAGTTTCCCTTAGAAGCTATGTGCCAAGTGTGGCAATCATCAGCAATGAAGGATATTTTCTAG 1494 0.4404 MVTLLHFFLTFMVLLFSWNFFFKTRRFWNLPPGPFSFPIIGNLHQMRQPLHRTFHALSQKHGKVFSLWFGSRFVVVVSSLEAVQECFTKNDIVLANRPRFLAGKYIGYNNTTVAVSPYGDHWRNLRRIMSLEVLSTHRLNCFLEIRRDEIMRLVRKLAHDSRNGFAKVELKSSFSEMTFNTIMRMVSGKRYYGEDCDVSDVEEAKQFRGIIKELVALGGANNPGDFLALLRWFDFDDLKKKLKRISKRTDAFLQGLIDEHRNRKQSANTMIDHLLTQQQSQPEYYTDEIIKGLALVIIMAGTDTSAVTLEWAMSNLLNHPEILKKAKRELDTHIGQNRLVDEVDIPKLTYIQSIVNETLRLHPAAPMLVPHFSSEDCTIGDYNLPQNTILLVNAWAIHRDPNLWSDPTHFKPERFENESEVNKLLPFGLGRRACPGSNLAQRTVTLTLALLIQCFEWKRTSIEEIDLIEGKGITVGRKFPLEAMCQVWQSSAMKDIF 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00275 497 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS P450 superfamily signature 434 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 SUPERFAMILY Cytochrome P450 31 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 Gene3D Cytochrome P450 22 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 Pfam Cytochrome P450 31 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00275 497 CDD CYP81 62 481 - -
Vimu8g00275 497 Coils Coil 257 277 - -
Vimu8g00275 497 FunFam Cytochrome P450 family protein 21 491 - -
Vimu8g00275 497 PANTHER CYTOCHROME P450 82C3-RELATED 9 486 - -
Vimu8g00275 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00275 Vimu-Chr8 7788461 7790699 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00275 5 490 Cytochrome P450 AT4G37370 55.828 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00275 K13260 - gmx:100811727 845.114