Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00272 ATGTATAAACTAAGGGTCATGGAAACGTCACTTAATACTATGATGAGGCTCGTGTCGGGAAAGAGATTCTACGGTGATGACTGTGATGTGAGTGATGTGGAGAAGGCCAAAGAATTTAGAGGCATCCTTAGAGAAATGGTGTCATTAGCAGGAGTAAATAATCGTGGAGACTTTTTGCCTTTCTTGAGGTGGTTTGATTTAGATAATTTGGAGAAGAGGCTAAAGAATATTGGAAAGAGAATCGATGCATTCTTACAATCACTCATTGACGAAATCCGTGCTTCAAATAAGACTACCAATACTATGATATCTCAGCTCTTAGTTCAGCAACGAACACAACCTGAGCAATACAGCGATCAAATTATCAAAGGACTTTGCATGAGTATGTTACTTGCAGGAACAGATACATCAGCTTTAACTTTAGAATGGGGAATGGCTAATTTATTGAACCATCCAGAAGTTTTAAAGAGAGCAAAAGAAGAGCTAGACACTCATGTGGGATCAGATCGTCTGGTAGAAGAATCAGATATGTCAAAACTTCCTTATGTTCTAAACATTTTTTTTGAGACGATAAGATTGCATCCTGCTGCTCCACTTTGGTCACCACATATGTCTTCAGAAGATTGTACCATCGGAGGATATAATCTCCCAAAAAACACAATTCTGTTGGTTAATGCATGGTCCATTCATCACGATCCAAATTTGTGGAAGAACCCATATGAATTTAGGCCTGAAAGGTTTGAGAAGGAATGTGACTCAAGCAAATTGCTTTCATTTGGATTAGGAAGGAGGTCTTGTCCTGGAAACAACTTGGCTCAACGTAGTGTGGGATTAGCTTTGGCTTCATTGATTCAATGTTTTGAGTGGGAACGAATTGGTAAGGAAGAAATTGATATGACTGAAGCAAAGGGAATCACTATATCAAGGCAAAACCCATTGGAAGTTATGTGCAAAGCTCGTCAAATCCCAGCTATTACGGATCTGTATTGA 990 0.3899 MYKLRVMETSLNTMMRLVSGKRFYGDDCDVSDVEKAKEFRGILREMVSLAGVNNRGDFLPFLRWFDLDNLEKRLKNIGKRIDAFLQSLIDEIRASNKTTNTMISQLLVQQRTQPEQYSDQIIKGLCMSMLLAGTDTSALTLEWGMANLLNHPEVLKRAKEELDTHVGSDRLVEESDMSKLPYVLNIFFETIRLHPAAPLWSPHMSSEDCTIGGYNLPKNTILLVNAWSIHHDPNLWKNPYEFRPERFEKECDSSKLLSFGLGRRSCPGNNLAQRSVGLALASLIQCFEWERIGKEEIDMTEAKGITISRQNPLEVMCKARQIPAITDLY 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00272 329 Coils Coil 67 87 - -
Vimu8g00272 329 PRINTS E-class P450 group I signature 9 27 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS E-class P450 group I signature 121 138 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS E-class P450 group I signature 256 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS E-class P450 group I signature 266 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS E-class P450 group I signature 141 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS E-class P450 group I signature 225 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS P450 superfamily signature 257 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS P450 superfamily signature 185 196 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS P450 superfamily signature 266 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 PRINTS P450 superfamily signature 132 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 SUPERFAMILY Cytochrome P450 9 320 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 Pfam Cytochrome P450 7 306 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 Gene3D Cytochrome P450 3 325 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00272 329 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 259 268 IPR017972 GO:0005506|GO:0016705
Vimu8g00272 329 PANTHER CYTOCHROME P450 82C3-RELATED 5 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00272 Vimu-Chr8 7651306 7652385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00272 6 320 Cytochrome P450 AT5G36220 53.651 1.07e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00272 K13260 - gmx:100811727 457.603