Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00271 ATGGCTCTGTTATATTATGGTTTGGTGATAGTAGTTTTTCTGTATTCTCTTAAGGTGTTGTTTGGATCTAGAAAATTCAGAAACCTTCCTCCAGGGCCTTTTGCTTACCCTATAGTAGGAAACCTCTTGCAACTTCAACAGCCTTTTCACCGTTTTTTCACTCGATTGTCCAAAAAACATGGCAAAGTCTTCTCTCTATGGTTCGGCAACCGTCTCGTTATCGTTGCTTCTGACTTACCCGTGGTGCAAGAATGCTTCACCAAAAACGACACCGTCTTGGCTAACCGACCCCACTTTCTCCTTGGCAAACACATCAGTTACAACAACAGCACCATCCTTCACTCCTGTTACGGTGAACATTGGCGCCATCTCCGCCGCATCTTGTCCCTCGAGGTTGTCTCAACACACCGTTTGAATGCCTCCTACGAAATCCGAAGGGACGAACTCACCAAACTCTTGCAGAAACTTGCTCGCATCTCGCGCAACGACTTCACTAAAGTCGATCTCAAATCCATGTGA 519 0.4586 MALLYYGLVIVVFLYSLKVLFGSRKFRNLPPGPFAYPIVGNLLQLQQPFHRFFTRLSKKHGKVFSLWFGNRLVIVASDLPVVQECFTKNDTVLANRPHFLLGKHISYNNSTILHSCYGEHWRHLRRILSLEVVSTHRLNASYEIRRDELTKLLQKLARISRNDFTKVDLKSM 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00271 172 Pfam Cytochrome P450 30 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00271 172 Gene3D Cytochrome P450 23 172 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu8g00271 172 PANTHER CYTOCHROME P450 FAMILY 1 8 170 - -
Vimu8g00271 172 SUPERFAMILY Cytochrome P450 24 162 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00271 Vimu-Chr8 7650604 7651122 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00271 8 158 Cytochrome P450 AT5G57220 49.020 2.17e-46 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00271 K13260 - pvu:PHAVU_004G0682000 295.819