Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00238 ATGCAAGTCTTGTCAGGTTTATTGATTCATTTAGCGACATCAACACCTACTGCATTCAGACATAGAGAACATACCTCGAATGGTCTCCTAATAGCTTCCGTTGACGAAGAACCCTCACGTCACAGGAGCACCCTCTTCACAGAAACGCCACACGCCGTGATGTTAACGGACCACCCGCTGATAGCAACGCCAACACACTGGTGGAACAAACACTTGAACACCACTACGGGGAAGGTTTGCCAAGTGAACCCTAACCACCCAATGCCACCGGACAGACGGGAAAGGGAGACGAAGATAATGGGAAGTACAATGGTAGTTCAATTGGGGACGGGAATGGAGAGGGAGAGAACGGGGTGCACCACGCGAAATTGGGGATTGTCTTACGAAATTGAGGACGACCTTCTACAATACCCCCAATTTTTCATTTTAAAGTCTAGCCTCTTACCCAAGGCCATAAATTCCTCGGTAATGCTCTCGAGGCCTTCGCACACACTGTCACTTTCTTTCATCTCTTCCCTTCCCATCTCTCGTTCCCATACCATCAATCATTCCCCTCTTCACCCCACTCACACCGACTCACCCCCCGCATTCCCATTCCCCAAACGCTGTCGTTTCCAGAGTTTCTCATCCTTCAAATTCGTTTCACACTCAGCGCTGGAGTCGCACCACGAGCTGTTGAAGCCGCCCTCGCCCTCCGCCACCGCCTCTCAGATCCGCCTCAGCTCCTCGTTCTCAGGCGAACTTCTCGCCGCCGAGCTGGAGCTCGAAACAACCAAAATGATCAAGCGCTCCGGGCGGCAGCCGCCGCCGGAGTCGCTTGCAGACAAGATCTACAACCTCCGGGGAGCGTTTCTCATGGTAGCGGTTCCGCTCCTCCTCGTCGCCCTCGTGCTCTACGCCATGCCTTCCGCCTCCTCCAACGAGTCCATCGAAGACTACGCCCTAACGCACCGCAAGGCTGCCCCCGATCGGAAAACTGCCTTCGCTGTCATCTTCGATGCCGGTAGCTCCGGCAGCCGTGTCCACGTCTTCCGTTTCGACCAGAACTTGGATCTCGTTCCCATCGGGAATGACCTCGAGCTTTTCGTCCAGGTGAGTGAAAATCGTGGATCTGCGTTTTCCTTCGAAATAGTTTACTCTAATCTAATTAAACCTGGTTTGAGTGCTTATGCACAGAATCCACAACAGGCAGCTGAATCTTTGATTACACTATTGGATAAAGCTGAGAGTGTTGTTCCTCAGGAGTTTCGGCCTAAGACACCTGTCAGAGTTGGGGCAACTGCAGGGTTGAGGGCTTTGGAAGGGGATGCTTCTGACAGGATTTTGCAAGCGGTTCGGAATTTGCTTAAGCAAAGAAGCACTCTAAAATCTGAGTCTGATTCGGTAAGAGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTGACTATCAACTATCTACTGGGAAACCTAGGAAGAGATTATTCAGAGACAGTTGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAGATGGCATATGCCATCTCAGAGACAGATGCTACCGGGGCTCCAACTGTATCAGTTGGAGAGGACCAATATGTCAAGAAGATGTTCCTTAGGGGAAGGAAATATTACCTCTATGTTCACAGTTACTTGGGCTATGGTTTACTAGCAGCTCGTGCGAAGATTTTAAAGGTTTCGGATGATTTTGGAAACCCTTGCATCTTAGATGGCTTTAACGGATCTTACAAATATGGAGGAAAGTCGTTTAAGGCTTCATCCTATCCTTCTGGTGCAAGCTTGAATGAATGCAAAAGCATAGCTCTTAAGGCTCTCAAGGTTAACGAGTCAAAATGCACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGTGGCGGTGATGGACAGAAAAATCTTTTTGTTGCCTCATTTTTCTTTGACCGGGCAGCTGAGGCTGGTTTTGCCGACCCAAACTCACCCGTTGTGAAGGTTCGTCCCGTGGATTTCGAGGCTGCATCTAAGCAAGCTTGTCGAACAAAGATTGAAGATGTCAAATCCTTTTATCCACTTGTTGAGGAAGGGAACCGTCCATATTTATGCATGGATCTCTTATACCAATATACATTGCTTGTTGCTGGATTCGGTCAATCTTTCTGCAAAATCTTGAGAATATTATTCTCTTCCACTGACTGGATTCTTCTTTTGGCAGGCCTAGATCCATGGCAACAGATGACGTTAGTGAAGAAAGTTAAATACCATGATGCTCTTGTTGAGGCTGCATGGCCCTTAGGCAGCGCCATAGAAGCTGTATCATCTACATAA 2310 0.487 MQVLSGLLIHLATSTPTAFRHREHTSNGLLIASVDEEPSRHRSTLFTETPHAVMLTDHPLIATPTHWWNKHLNTTTGKVCQVNPNHPMPPDRRERETKIMGSTMVVQLGTGMERERTGCTTRNWGLSYEIEDDLLQYPQFFILKSSLLPKAINSSVMLSRPSHTLSLSFISSLPISRSHTINHSPLHPTHTDSPPAFPFPKRCRFQSFSSFKFVSHSALESHHELLKPPSPSATASQIRLSSSFSGELLAAELELETTKMIKRSGRQPPPESLADKIYNLRGAFLMVAVPLLLVALVLYAMPSASSNESIEDYALTHRKAAPDRKTAFAVIFDAGSSGSRVHVFRFDQNLDLVPIGNDLELFVQVSENRGSAFSFEIVYSNLIKPGLSAYAQNPQQAAESLITLLDKAESVVPQEFRPKTPVRVGATAGLRALEGDASDRILQAVRNLLKQRSTLKSESDSVRVLDGTQEGAFQWVTINYLLGNLGRDYSETVGVVDLGGGSVQMAYAISETDATGAPTVSVGEDQYVKKMFLRGRKYYLYVHSYLGYGLLAARAKILKVSDDFGNPCILDGFNGSYKYGGKSFKASSYPSGASLNECKSIALKALKVNESKCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNSPVVKVRPVDFEAASKQACRTKIEDVKSFYPLVEEGNRPYLCMDLLYQYTLLVAGFGQSFCKILRILFSSTDWILLLAGLDPWQQMTLVKKVKYHDALVEAAWPLGSAIEAVSST 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00238 769 FunFam Apyrase 1 466 720 - -
Vimu8g00238 769 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 275 768 IPR000407 GO:0016787
Vimu8g00238 769 Pfam GDA1/CD39 (nucleoside phosphatase) family 324 768 IPR000407 GO:0016787
Vimu8g00238 769 Gene3D - 314 466 - -
Vimu8g00238 769 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 465 480 IPR000407 GO:0016787
Vimu8g00238 769 Gene3D Exopolyphosphatase. Domain 2 467 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00238 Vimu-Chr8 7074286 7087213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00238 271 768 Calmodulin-binding Proteins AT3G04080 62.400 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00238 K14641 - gmx:100804818 775.007