Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00209 ATGGAACTCTTATTGTCGTGTCACGGAGCTCTCATTTTGCCACCACTTCGCGTCTTCTCACTTTCAACAAAACTTCTGAAGGGTAGCATAGACTCTGAAATTCACAAGTCCAACCTGCATGCCTCTCCATTATCACCAAGATGCCCAACGAAACAAGTTCGTCTAAATGACAAACCCCTTTCGGTGGTCGAACACAAATTAGGAGAGAGAGAGCTGCACCTCGACGCGATGATCGGGAAGGCGAAGCCCAAGAAGCACACAACTAAGGAGATCGCGACGAAGATCGACGCCGCCACTACCAACCGCGGCGGCGGTAAGGCGGGCTTGGCAGATCGGTCTGGTGTGGAGAAAGGCGGGCACACAATATACGAGTGCTTGCTCTTCAAAGTCACGATGTCTGACATGAAATCAATGCAGATTGATCACGAGGCGCGTCACCCTAAGATCCCCTTTGAGGAGGACAAGGTCGTCAACCTTCACACCCTAATCGCCAGCGAATCGTCGAAGCTGCGTCTAGGCATTTAG 525 0.5143 MELLLSCHGALILPPLRVFSLSTKLLKGSIDSEIHKSNLHASPLSPRCPTKQVRLNDKPLSVVEHKLGERELHLDAMIGKAKPKKHTTKEIATKIDAATTNRGGGKAGLADRSGVEKGGHTIYECLLFKVTMSDMKSMQIDHEARHPKIPFEEDKVVNLHTLIASESSKLRLGI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00209 174 PANTHER GEO09665P1-RELATED 77 155 IPR045230 -
Vimu8g00209 174 SUPERFAMILY Expressed protein At2g23090/F21P24.15 103 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00209 Vimu-Chr8 6564843 6565567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00209 77 174 C2H2 Transcription Factor Family AT3G02790 62.626 1.26e-37 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00209 - - csav:115697944 153.295