Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00168 ATGGTATTCTCTACAGCATATGGGAGAGGTGATGAACTTAGTTGGGGAAGCATCAAAGGGTTTTCACTCCAAGTCCTTACAGGGAGGTGGTTCATGATGTTTTCATCATTTATGTTGATGTCAGTGTCAGGAGCAAGCTACATGTTTAGCCTATTCTCACAAGATATAAAGTTAGTTCTTGGTTATGACCAATCCACTCTCAATCTATTAAGCTTCTTCCAGGAGTTGGGAGCCAACATAGGCATTCATGCAGGCCTAATCTATGAGGTCACACCACCTTGGTTTATCTTAGCAATTGGTGGGGTTCTCAACTTTGCTGGGTATTTTATGATTTGGCTTGTTGTCACCAGCAAAATTGCAAAGCCCCATGTGTGGCAGATGTGCTTCTACCTTTTCATTGGAGCCAATTCTCATTGTGCAACTAACACTGGAGCTCTTGTGACCAGTGTAATAAACTTCCCTATCAGCAGAGGAGTAGTCTTAGGCCTTTTGACTGGGTATACAGGTTTAAGTGCAGTAATAATTACTCAGCTATACTATGCCTTGTATGGAGATGACTCCAAATTCCTCATTTTTCTCATGGCATGGCTACCAATTGCTGCAGTTTTTCTGTTTCTTCCAGCTATCAGAATCCACAAGAGTGTTCAACAGCCAAATGACACCAAAGCTTTATCCAGGTTCCTCTATCTGACATTAGTCCTTGCAGGGTTCCTCATGTTTGTAACTTTAGTACAACAATTTTTCACTTTCTCTCAGTTTGAGTATCAGATTACTACCACTGTGATGCTTCTTCTGCTCATCCTTCCACTTTCTGTTGTTATTGTGGAAGAACACAAGATTTGGAAGAGTAAGCTTGAAAACATCAATAGGGAAGATAGTCAGAAGCTCCTGGAAAACTATCCAAACATAGCTACAGAAAATCCTTATCAAGAGAAGTCTTCCCAGGCTCCCCAAGAAGAAATCTCCTTTTGGGAAAACATATTCAACCCCCCAGAAAGAGGTGAAGATCATACAATACTTCAAGCCACTTTTAGCCTTGACATGGTGCTTCTCTTATTAACTTCTATATGCTCACTTGGTAGCAACGTCACAATGATAAACAACTTGAGTCAAATTGGAATTTCATTAGGATATCCTTCTCATACCATAACCACATTTGTCTCTCTTACATCCATTTGGATCTATTTAGGTAAGGTGGTTCAAGGGGTTGTCTCAGAGTTTATCATACTCAAATATAGAGTCCCTAGGCCTCTCATGCTCACATCATTGCTTTTGTTATCTTGTGTAGGTCATCTTTTAGTTGCCTTCAATGTTCCAAATGGTCTCTATGTAGCCTCAATTGTTATAGGGTTCTGCTATGGGGCTAATTGGCCATTAATCTATTCTGTTATATCTGAACTTTTTGGCCTCAAACATTATTCAACACTGTACAATTTAGGGTCACTAGCAGGTCCAATTGGGTCATACTTGCTAAGTGTGAGGGTTGCAGGGTATCTGTATGACAGGGAAGCCATGAGGCAAATGGAAGCTATGGGGAAAAAGACAAATCCAGGGGAGGAGCTGAACTGCAATGGGGAGGAGTGCTTCAAGTTAGCATTCATTATAATCACTGCAGTTTGCTTGTTTGGGGCACTTCTGTCACTCATTTTGGTCTTTAGGACTAAACAACTTTACAGAAGTGACCTATACAAGAAATATAAAGAAGCTAAAACTGATGAAACTGAAACAGGTGTGTTACAACATGATTGA 1749 0.4037 MVFSTAYGRGDELSWGSIKGFSLQVLTGRWFMMFSSFMLMSVSGASYMFSLFSQDIKLVLGYDQSTLNLLSFFQELGANIGIHAGLIYEVTPPWFILAIGGVLNFAGYFMIWLVVTSKIAKPHVWQMCFYLFIGANSHCATNTGALVTSVINFPISRGVVLGLLTGYTGLSAVIITQLYYALYGDDSKFLIFLMAWLPIAAVFLFLPAIRIHKSVQQPNDTKALSRFLYLTLVLAGFLMFVTLVQQFFTFSQFEYQITTTVMLLLLILPLSVVIVEEHKIWKSKLENINREDSQKLLENYPNIATENPYQEKSSQAPQEEISFWENIFNPPERGEDHTILQATFSLDMVLLLLTSICSLGSNVTMINNLSQIGISLGYPSHTITTFVSLTSIWIYLGKVVQGVVSEFIILKYRVPRPLMLTSLLLLSCVGHLLVAFNVPNGLYVASIVIGFCYGANWPLIYSVISELFGLKHYSTLYNLGSLAGPIGSYLLSVRVAGYLYDREAMRQMEAMGKKTNPGEELNCNGEECFKLAFIIITAVCLFGALLSLILVFRTKQLYRSDLYKKYKEAKTDETETGVLQHD 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00168 582 CDD MFS_Mch1p_like 28 544 - -
Vimu8g00168 582 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 563 - -
Vimu8g00168 582 Pfam Nodulin-like 29 274 IPR010658 -
Vimu8g00168 582 Pfam Major Facilitator Superfamily 351 555 IPR011701 GO:0022857|GO:0055085
Vimu8g00168 582 SUPERFAMILY MFS general substrate transporter 329 557 IPR036259 -
Vimu8g00168 582 Gene3D MFS general substrate transporter like domains 343 559 IPR036259 -
Vimu8g00168 582 SUPERFAMILY MFS general substrate transporter 31 268 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00168 Vimu-Chr8 5948713 5950461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00168 16 568 Nodulin-like Gene Family AT2G39210 57.245 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00168 - - vra:106766696 1036.17