Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00133 ATGACCAAGATTAACAGGCGGTCTGGTAAAGAGCTCGAAGATGCTGGTTTTGTGAAGATGATTCCCACTAAGCCCATGGTGGTTGAAACCTCCGAATATCCTCCCCTGTGTCAAATTGTGGCTGTGGGAGTCATCAAAAGCGTGGAGAAGAAGGACCTTACTAGAGCTAAGATGGTCTATCAAGAAATGTCATTTGTTATGACTATGATGAATGGTTTCTTGTTGGAGATGCTGCTATTCAGATTATGTACAGAAATCATATCTCCGGTACCCAATGCTTTCGAAGAACTTGAGTTGAAGTTTGATGCAGATGTTGTTGTCATTCAAATGGGGGCTGCCAAGAAATGCCTGTTGTTATGTATCTTCTCTGTTGATGAAAAACTGAAACATCTCACTCTTACCCAAAGTGTCGAACATTACTTGGTTATTACTATCATGGGAAAGATAAACCCGACGACTTCTTCAACCACATCAACCGCGTCTCCCTCGTTGACAGTCACTGAGCCAAGATGGTATTAA 519 0.422 MTKINRRSGKELEDAGFVKMIPTKPMVVETSEYPPLCQIVAVGVIKSVEKKDLTRAKMVYQEMSFVMTMMNGFLLEMLLFRLCTEIISPVPNAFEELELKFDADVVVIQMGAAKKCLLLCIFSVDEKLKHLTLTQSVEHYLVITIMGKINPTTSSTTSTASPSLTVTEPRWY 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00133 172 PANTHER ELONGATION FACTOR 1 ALPHA 2 59 - -
Vimu8g00133 172 MobiDBLite consensus disorder prediction 153 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00133 Vimu-Chr8 4976775 4977903 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00133 1 58 Eukaryotic Initiation Factors Gene Family AT5G60390 61.842 1.85e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00133 K03231 - gmx:100499630 80.4925