Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00124 ATGGAGGAGCAACCAAAAAGGGAACCTAGTCCCCTCCGAAAAATGGTGGCGGTGTCATCCATCGCTGCCGGTATCCAATTCGGATGGGCCCTACAACTCTCCCTTCTAACACCATATGTACAAACCCTAGGAGTTCCTCATGCTTGGGCCTCCTTCATCTGGCTCTGTGGCCCCATCTCTGGCCTCGTAGTTCAGCCCATTGTAGGCTATTGCAGTGACCATTGCAAGTCTTCTTTCGGTCGTCGTCGTCCTTTTATCCTCGCCGGTGCACTTTTCGTTGCCATCGCCATTATTCTTATTGGCTTCGCTGCCGATATAGGACACTTAGCTGGCGATGATATCACCCAGAAAACCCGTCCACGTGCCGTCGCCATTTTCGTCATTGGCTTCTGGATCTTAGATGTTGCCAACAACATGCTCCAAGGTCCATGTCGCGCCTTCCTTGGTGACTTGGCTGCCGGCGATCAGAAGAAGACGAGAACCGCAAACTCGTTCTACTCTTTTTTCATGGCTGTCGGCAACGTCCTGGGCTATGCCGCAGGATCCTATGACGATCTCCACAAGATCTTCCCTTTCACGGAAACTGAGGCATGCAACGTCTTCTGCGCAAACCTAAAGAGTTGCTTTTTCTTCTCCATCGTTCTTCTTCTTGTTCTATGCATTATCGTTCTCTCTTGCGTGAATGACCCTCAGTTCATTCCGGCATCAGAGGAGACCAAAGATGATGAGGCAGAGAACACGCACCTTTCATGCTTCTGCGGAGAGTTGTGCGTTGCATTCAAGGGACTGAAGAAGCCAATGTGGATGTTGATGCTAGTGACAGCTGTTACATGGATTGCCTGGTTCCCATATGTATTGTTCGACACTGACTGGATGGGTCGTGAGGTGTACGGCGGTGATGTGGGTCAGAAGGCATACGATAATGGTGTTCATGCTGGCTCTTTGGGACTCATGTTGAATTCAGTGGTGTTGGCTGTGGCGTCTTTGGGTGTAGAACCAATGGGTCGCTTGGTTGGTGGAGTCAAGTGGTTGTGGGCAATCGTTAATGTTATTCTCGCAGTTTGCATGGCAATGACTGTGCCCATTGCAAAAATCGCTGAGCGTCAACGTGCCCTTAACCCTGCCCTCATTGGAAACCCCTCAATGGATGTGAAAGCTGGATCCTTAGCCTTCTTCTGCGTCCTTGGTATTCCTTTGGCGGTTACGTATAGTGTTCCCTTTGCTTTAGCCTCTATCTACTCTAGCAACACAGGAGCAGGACAAGGACTATCTTTGGGTCTTCTCAATGTTGCTATTGTCATTCCTCAGATGATTGTATCGGCAATTAGTGGACCGTGGGATGCTTGGTTTGGTGGTGGCAACTTGCCGGCGTTCGTGTTGGGCGCGGTGGCGGCTGCCATAGCTGCCATACTGGCAGTTGTTGTACTTCCAAACCCCAAGAAAGAAGATGCAACCAAGATTCCTAGCCTCTCCATGGGAAGCTTCCATTAA 1491 0.5023 MEEQPKREPSPLRKMVAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLVVQPIVGYCSDHCKSSFGRRRPFILAGALFVAIAIILIGFAADIGHLAGDDITQKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANSFYSFFMAVGNVLGYAAGSYDDLHKIFPFTETEACNVFCANLKSCFFFSIVLLLVLCIIVLSCVNDPQFIPASEETKDDEAENTHLSCFCGELCVAFKGLKKPMWMLMLVTAVTWIAWFPYVLFDTDWMGREVYGGDVGQKAYDNGVHAGSLGLMLNSVVLAVASLGVEPMGRLVGGVKWLWAIVNVILAVCMAMTVPIAKIAERQRALNPALIGNPSMDVKAGSLAFFCVLGIPLAVTYSVPFALASIYSSNTGAGQGLSLGLLNVAIVIPQMIVSAISGPWDAWFGGGNLPAFVLGAVAAAIAAILAVVVLPNPKKEDATKIPSLSMGSFH 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00124 496 FunFam Sucrose transport protein 9 476 - -
Vimu8g00124 496 PANTHER SUGAR TRANSPORTER 11 475 - -
Vimu8g00124 496 CDD MFS_SLC45_SUC 15 461 - -
Vimu8g00124 496 Gene3D MFS general substrate transporter like domains 8 476 IPR036259 -
Vimu8g00124 496 SUPERFAMILY MFS general substrate transporter 2 484 IPR036259 -
Vimu8g00124 496 Pfam MFS/sugar transport protein 27 243 - -
Vimu8g00124 496 NCBIfam sucrose/proton symporter 11 481 IPR005989 GO:0005886|GO:0008515|GO:0015770
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00124 Vimu-Chr8 4626493 4628477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00124 3 482 Sucrose Transporter Gene Family AT1G22710 62.218 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00124 K15378 - gmx:100785899 786.563