Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00115 ATGGAACCTTCTTCCTCTTCGCTTCAGGTGGAAACAGCAGAGCGGAAACAACCTAGTCCGCTCCGAAAAATGTTTGCTGTTTCTTCCCTTGCTGCGGGAATCCAATTTGGTTGGGCTCTGCAACTCTCTCTGTTAACCCCCTACGTTCAGACTTTGGGAGTTCCTCATGCCTGGTCCTCTTTCATCTGGCTCTGTGGTCCCATTTCTGGCTTGGTTGTGCAACCCATTGTAGGGTACACCAGTGATAGATGCACTTCCCGTTTTGGCCGCCGTCGTCCATTCATTATGAGTGGTGCGGTTGCCGTTGCCATATCTGTGTTTCTCATTGGCTATGCAGCTGATATTGGACACGCCACCGGTGACGATATAACCAAAAAAACACGTCCACGAGCTGTGGCTATTTTTGTGATTGGTTTTTGGATTTTGGATGTTGCTAACAACATGCTTCAGGGTCCATGCCGAGCTTTTCTCGGAGATCTTGCCGCCGGAGATCAGAAAAAGACCAGAACTGCCAATGCCTTTTATTCGTTTTTCATGGCAATTGGCAACGTTCTTGGCTATGCCGCTGGCTCCTATGATAAACTCCATCGTCTTTTTCCGTTCACTGAAACTAAGGCCTGTAACGTGTTTTGTGCAAACTTAAAAAGTTGTTTTTTCTTCTCCATACTCCTTCTTCTTGTCCTTTGTATCATTGTTCTCATTTGTGTGGAGGATCCACAGTTAAAGTTAGATTCTAGCAGGACTAACGATGAAAACGAAGACATTCAAACTGGATCGTGGTATTCGTGTTTTGGTGAATTGAGTGCGGCTTTTAAAGGGTTACAAAAACCAATGTTAATGTTGATGCTTGTCACTGCCATTAACTGGATCGCATGGTTTCCTTATGTGTTGTTCGACACTGATTGGATGGGTCGTGAAGTATACGGCGGTGATGTGGGCAATCCTGCATATAATGCCGGCGTGCATGCAGGTTCTTTAGGACTTATGTTGAATTCAATCGTTTTAGCTCTGATGTCATTGGCGGTGGAACCGTTGAGTCGTCTTGTCGGAGGAGTTAAGTGGCTATGGGCAATCGTTAATGTTATTCTCGCAGTTGGCATGGCAATGACGGTGGTGATCACAAATGCTGCACGCAATGAACGGAGGCATGAGGGTATCATGGCTGGTCATCCTTCCACCGCTGTTAAAGCTGGTGCATTGAGTTTCTTCTCCGTCCTCGGAATCCCTCTGGCGATTACTTTCAGTGTTCCATTTGCTCTGGCATCTATATACTCCAGCACTTCAGGTGCAGGCCAAGGTTTATCTTTGGGCGTCCTCAATGTTTCAATTGTCGTGCCCCAGATGATAGTATCAGCTATAAGTGGACAATGGGATAAATGGTTTGGTGGAGGTAACTTGCCGGCGTTTGTGTTGGGTGCCGTGGCGGCTGCCGTGAGTGCGGTGTTAGCTGTTGTTCTGCTGCCAACTCCGAAGCCAGCAGATGAGAGCAAAGCTTCGGTCACCGTGGGGAGTTTCCATTAG 1521 0.4727 MEPSSSSLQVETAERKQPSPLRKMFAVSSLAAGIQFGWALQLSLLTPYVQTLGVPHAWSSFIWLCGPISGLVVQPIVGYTSDRCTSRFGRRRPFIMSGAVAVAISVFLIGYAADIGHATGDDITKKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDQKKTRTANAFYSFFMAIGNVLGYAAGSYDKLHRLFPFTETKACNVFCANLKSCFFFSILLLLVLCIIVLICVEDPQLKLDSSRTNDENEDIQTGSWYSCFGELSAAFKGLQKPMLMLMLVTAINWIAWFPYVLFDTDWMGREVYGGDVGNPAYNAGVHAGSLGLMLNSIVLALMSLAVEPLSRLVGGVKWLWAIVNVILAVGMAMTVVITNAARNERRHEGIMAGHPSTAVKAGALSFFSVLGIPLAITFSVPFALASIYSSTSGAGQGLSLGVLNVSIVVPQMIVSAISGQWDKWFGGGNLPAFVLGAVAAAVSAVLAVVLLPTPKPADESKASVTVGSFH 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00115 506 FunFam Sucrose transport protein 18 487 - -
Vimu8g00115 506 SUPERFAMILY MFS general substrate transporter 22 492 IPR036259 -
Vimu8g00115 506 NCBIfam sucrose/proton symporter 20 491 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vimu8g00115 506 PANTHER SUGAR TRANSPORTER 20 486 - -
Vimu8g00115 506 Pfam MFS/sugar transport protein 25 291 - -
Vimu8g00115 506 CDD MFS_SLC45_SUC 24 469 - -
Vimu8g00115 506 Gene3D MFS general substrate transporter like domains 16 487 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00115 Vimu-Chr8 4448082 4450593 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00115 5 506 Sucrose Transporter Gene Family AT1G22710 61.793 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00115 K15378 - gmx:100782007 805.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g00115 8 4448082 4450593 Vimu3g02833 3 42581400 42584158 PCT