Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00083 ATGACTATAACCAAATTACTTTATTGTAGGACTGGAGTTGCATACATATCAAATGTTGCAGTACGAGAAAATTTTCGGAGGAAGGGAATAGCTAAAAAACTAATAGAAAGGGCTGAGTCTTATGCCAGAAGTTGGAGCTGTCGTGCAATTGCACTGCATTGTGACTTGGAAAATCCTGTGGCCACAATGCTATACAAAGGCCAAGGTTACAAATGTGTCATGGTTCCAGAAGGAGCAAAGTGGCCTCAACCAAGAACCTCATCAGATATCAGATTCAACTTCATGATGAAGCTTCTAAAAAACTCTCCATCTTCTAGTTAG 321 0.3988 MTITKLLYCRTGVAYISNVAVRENFRRKGIAKKLIERAESYARSWSCRAIALHCDLENPVATMLYKGQGYKCVMVPEGAKWPQPRTSSDIRFNFMMKLLKNSPSSS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00083 106 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 10 98 IPR016181 -
Vimu8g00083 106 CDD NAT_SF 12 53 - -
Vimu8g00083 106 Pfam Acetyltransferase (GNAT) family 10 70 IPR000182 GO:0016747
Vimu8g00083 106 Gene3D - 5 81 - -
Vimu8g00083 106 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 101 IPR000182 GO:0016747
Vimu8g00083 106 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00083 Vimu-Chr8 3791781 3792101 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu8g00083 Acetyltransf_1 1.6e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00083 - - gmx:100803930 177.948