Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00081 ATGTACAATTTGCCATGTTGCAGGACTGGAATTGCATACATATCAAATGTGGCAGTTCGTGAAAATTTTCGGAGGAAGGGAATAGCTACAAAACTGATAGAAAAGGCTGAATCTCATGCCAGAAGTTGGAACTGTGGTGCTATTGCACTGCATTGTGACATGGAAAATCGTTTGGCCACAATGTTTTACAAAGGCCAAGGCTACAAATGTGTCATTGTCCCAGAAGGAGCAAAGTGGCCTCAACCAATGACCTCAACAGATATGAGATTCAACTTCATGATGAAACTTCTGAAAAATTCACCACCTTCTACTTAG 315 0.4095 MYNLPCCRTGIAYISNVAVRENFRRKGIATKLIEKAESHARSWNCGAIALHCDMENRLATMFYKGQGYKCVIVPEGAKWPQPMTSTDMRFNFMMKLLKNSPPST 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00081 104 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 100 - -
Vimu8g00081 104 CDD NAT_SF 10 51 - -
Vimu8g00081 104 Gene3D - 3 73 - -
Vimu8g00081 104 Pfam Acetyltransferase (GNAT) family 9 68 IPR000182 GO:0016747
Vimu8g00081 104 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 93 IPR000182 GO:0016747
Vimu8g00081 104 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 97 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00081 Vimu-Chr8 3742279 3742593 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vimu8g00081 Acetyltransf_1 1.7e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00081 - - var:108344314 195.282