Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00074 ATGGAAATTAACATCATATCAAGAGAAGTCATTAAACCATCATTGCCAACTTCTGCAAAATGCAAAACCCTAAAACTATGTTTGTTTGATGTGTTGCAACGTAACACCTATTTTCCATTGATCCTTTTTTACAGCAAAACCACCAACCTTGAAGGATTCTCAAATGTCTCAACTGATCAGTTGAAGAAATCTCTATCTGAGGCACTAACCATTTTCTACCCTCTTGCAGGAAGAAGATGTGATTACTTTTCCATTGATTGCAATGATGAAGGTGCAATTTTCATGGAAGCTTCGGTGAACACCACCATGGAACTGTTCTTAAAACCACCTAATGTAGAACTGCTAAACCAGTTACTTCCATGTGAGCCTATCAAGTGCCATCCTCACCAAGAAGTGTTGCCCCAGTTTCTTGTTCAAGTAAACAAATTCCAATGTGGAGGAATAGCCATTGGCTTGTGTAACCTCCACATTCTCTTGGATGCATATTCTTGCAGTGCCTTCTTGAAAATCTGGTTTGCCATTTGCAAAGGGTCAAAGGGAGAAATCTCAAGACCAGATTTCTCTCTTGCTGCTTCTGCCTTCCCTCCAACAATCCCCACTGGTGTACGTCCTGGCATATTTAATGTAATAGAAGAAAACTGCACCACAAGAAGATTCTTGTTTGATCACAAAGCCATGAATGAGCTAAAATCCATGTCAACAAGTGATGAAACAAAACCAACACGATACCAAGTAGTATCTTCATTCATAAGCAAACATATGATTATAGCAATCCAAGAGGAATGTTGTGACAAAACCATACCAACGGTTGCATTGCATATTGGGGACATAAGAAAAAGGATGGGGGACCCTTTTACAAAAGGTGTTGTTGGAAATTTGGTTTGGCCTGCAATTGTATTTGTTGAGGGTGTGAACAAGAACACTGAGATTATAGATTTGGTTGAAATTCTGAAAAAAGGACTTGGAAAGCTCACAAAGGATTTGTTTCTAAAAGTGCAGAATGATCCTAGTTTTTGGTGGAATGGTAAGTATGCAGAGCTAATGCTTGAAGGTATACCAACAAATAAAACAATCTCATTGGTGTTCACAAGTTGGGCTAATATTGGATTCAATGAACTGGATTTTGGTTGTGGAAATCCTTTTTGGCTTGCTTATGGTGGAGGTACTAAAGATACTACCTCAAACTCAGTAATATTGATGGAAACAAGAGAGGGAATAGAGGCATGGATCACAATGACAGAGAAACATATAACTATCTTGGAACATGATGTGGATTTCCTTCAATTTGCATTGCTTAATCCTAGTGTTTCAATCTGA 1317 0.3842 MEINIISREVIKPSLPTSAKCKTLKLCLFDVLQRNTYFPLILFYSKTTNLEGFSNVSTDQLKKSLSEALTIFYPLAGRRCDYFSIDCNDEGAIFMEASVNTTMELFLKPPNVELLNQLLPCEPIKCHPHQEVLPQFLVQVNKFQCGGIAIGLCNLHILLDAYSCSAFLKIWFAICKGSKGEISRPDFSLAASAFPPTIPTGVRPGIFNVIEENCTTRRFLFDHKAMNELKSMSTSDETKPTRYQVVSSFISKHMIIAIQEECCDKTIPTVALHIGDIRKRMGDPFTKGVVGNLVWPAIVFVEGVNKNTEIIDLVEILKKGLGKLTKDLFLKVQNDPSFWWNGKYAELMLEGIPTNKTISLVFTSWANIGFNELDFGCGNPFWLAYGGGTKDTTSNSVILMETREGIEAWITMTEKHITILEHDVDFLQFALLNPSVSI 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00074 438 Pfam Transferase family 1 426 - -
Vimu8g00074 438 Gene3D - 1 200 IPR023213 -
Vimu8g00074 438 Gene3D - 211 429 IPR023213 -
Vimu8g00074 438 PANTHER F21J9.9 4 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00074 Vimu-Chr8 3641736 3643052 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00074 1 421 Monolignol Biosynthesis Gene Families AT5G48930 24.444 1.97e-19 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00074 - - vum:124842637 791.956