Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00041 CATTTCTCGAATCTAAGAACCTCAAAGTTGAACACAGAAGGGAAAAAGGGATTAGGGTTTCAGAAGCAGCGTGCGATTATGGATTTTACAGCTGAGAAGAAGGAATCAGAGAACAACAGCGCCAATAACCCCGAAAACGCTCATCAAACGTTAGATTCTTCTTCTCAATTGGCGTCGGCACTTGATTCAAGCAGCAAAGAAACCGAAGAACGACAATCTCGTGAACTCAAAGCTGGTCTTCACCCTCTGAAGAACAAATTTGTCTTCTGGTACACTCGTCGAACACCTGGAGTTCGAAACCAGACCTCATATGAGGACAACATAAAGAAAATTGTTGAATTTAGTACGGTTGAAGGATTTTGGGTCTGCTATTGCCATCTTGCCCGGCCTGCTTCTTTGCCTAGTCCCACAGATTTGCACCTTTTCAAGGAAGGAATTCGCCCTTTATGGGAGGACTCTGCTAACTGCAATGGTGGTAAATGGATTATACGATTCAAAAAGGTTGTCTCGGGTCGGTTTTGGGAGGACCTGGTTCTTGCCTTAGTGGGTGACCAATTGGATTATGGGGATAACATATGCGGTGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCTTCAGACCATCAGGCTGTAATGGCCCTGAGAGATTCAATCAAACGTCACTTGAAGCTTCCTCACAGCTATGTTATGGAGTACAAACCCCATGACGCCTCTCTGCGAGACAATTCATCCTACAGGAACACTTGGTTGAGAGGGTAG 783 0.4483 HFSNLRTSKLNTEGKKGLGFQKQRAIMDFTAEKKESENNSANNPENAHQTLDSSSQLASALDSSSKETEERQSRELKAGLHPLKNKFVFWYTRRTPGVRNQTSYEDNIKKIVEFSTVEGFWVCYCHLARPASLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00041 260 MobiDBLite consensus disorder prediction 40 63 - -
Vimu8g00041 260 FunFam Eukaryotic translation initiation factor NCBP 53 253 - -
Vimu8g00041 260 Pfam Eukaryotic initiation factor 4E 82 240 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vimu8g00041 260 SUPERFAMILY eIF4e-like 71 256 IPR023398 -
Vimu8g00041 260 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 44 249 IPR001040 GO:0003723|GO:0003743|GO:0006413
Vimu8g00041 260 MobiDBLite consensus disorder prediction 28 76 - -
Vimu8g00041 260 Gene3D RNA Cap, Translation Initiation Factor Eif4e 53 253 IPR023398 -
Vimu8g00041 260 ProSitePatterns Eukaryotic initiation factor 4E signature. 138 161 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00041 Vimu-Chr8 3175735 3178572 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00041 68 260 Eukaryotic Initiation Factors Gene Family AT5G18110 86.528 9.68e-128 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00041 K03259 - gmx:100499744 439.499