Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g00010 ATGGAAATTAAAATCACATCAAGAGAAACCATTAAACCATCACTACCAACTTCTACAGAATGCAAAACCCTAAAATTATGCTTGTTTGATGTCTTTCAACTCAACACCTATTTTCCATTGATCCTTTTTTACAAAAAAACCACCAAGCTTGAAGGATTCTCAGATGTCTCAACTCAGTTGAAGAAATCATTATCTGAGGCACTAACCATTTTCTACCCTCTTGCTGGTAGAAGATGTGATTACTTTTCCATTGATTGCAACGATGAAGGTGCAATTTTCATGGAAGCTTCGGTGAGCACCAACATGGAAGTGTTCTTAAAACCACCCAAATTAGAACTGTTAAACCAGTTACTTCCATGTGAGCCTAACAAGTGCCATCCTCATGAAGAAGTGTTGCCCCAATTACTTGTTCAAGTAAGCAAATTCGAATGTGGAGGAATAGCCATTGGCATGTGCAACCTCCATATTCTCTTGGATGCATATTCTTGCAGTGCCTTCTTGAAAACCTGGTTTGCCATTTGCAAAGGGTCAAAGGAAAAAATCTTATGGCCAGATTTCTCTTTTGCTGCTTCTTCCTTCCCTCCAAGAAACACAACTGGTGTACGTGTTGGCATGTTGAATATAAACAAGGACTCAAACATAGAAGAAAACTGCACCACAAGAAGATTCTTGTTTGATCACAACGCCATCAAAGAGCTCAAATCCATGTCAACATGTGATGAAACAAAACCTACACGGTACCAGGTAGTATCTTCATTCATAAGCAAACATATGATTGTAGCAATCAAAGAGGACAAAACAAGACCAATGGTTGCATTGCATGTTGTGGACATGAGAAAAAGAATGGGGGAACCTTTCTCAAAAGGCGTTGTTGGAAATTTGTTATGGCCTGCACTGGTTGTTCTTGAGGATGTAAATAAGGACACTGAGATCATAGATTTGGTTGAAATTCTAAAAGAAGGACTTGGAAAACTAACTAAGGATTTGTTTCTGAAAGTGCAGAATGATCCTTGTTTTTTGTGGAGTGATGAGTGTGCAGAACTAATGCTTGAAGGTATAGCAGAAAATAAACCAATCTCATTAGTGTTCACAAGTTGGGGTAATATGGGATTCAACAAAGTGGATTTCGGTTGTGGAAAACCTTTTTGGCTAGCTCAAAGAGGAGGTACTAAAGAAAGTATCCCAAACACAGTGATATTGATGGAAACAAGAGAGGGAATAGAGGCATGGATCACAATGCCAGAGAAACATATAAGTATCTTGGAACATGATGTGGATTTCCTTCAATTTGCATTGCTTAATCCTACTATTTTAATCTAA 1320 0.3818 MEIKITSRETIKPSLPTSTECKTLKLCLFDVFQLNTYFPLILFYKKTTKLEGFSDVSTQLKKSLSEALTIFYPLAGRRCDYFSIDCNDEGAIFMEASVSTNMEVFLKPPKLELLNQLLPCEPNKCHPHEEVLPQLLVQVSKFECGGIAIGMCNLHILLDAYSCSAFLKTWFAICKGSKEKILWPDFSFAASSFPPRNTTGVRVGMLNINKDSNIEENCTTRRFLFDHNAIKELKSMSTCDETKPTRYQVVSSFISKHMIVAIKEDKTRPMVALHVVDMRKRMGEPFSKGVVGNLLWPALVVLEDVNKDTEIIDLVEILKEGLGKLTKDLFLKVQNDPCFLWSDECAELMLEGIAENKPISLVFTSWGNMGFNKVDFGCGKPFWLAQRGGTKESIPNTVILMETREGIEAWITMPEKHISILEHDVDFLQFALLNPTILI 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g00010 439 Pfam Transferase family 1 427 - -
Vimu8g00010 439 Gene3D - 1 202 IPR023213 -
Vimu8g00010 439 PANTHER F21J9.9 4 431 - -
Vimu8g00010 439 Gene3D - 215 430 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g00010 Vimu-Chr8 216132 217451 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g00010 1 422 Monolignol Biosynthesis Gene Families AT5G48930 23.714 5.68e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g00010 - - gmx:102667966 712.99