Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04180 ATGAGTCTTTTACTCGGTGCTGTAGTTCTCCTCGTTTTCTTAGCGGTGAAATTTCTCTACGCAAATTTGTGGGTTCCCCGGCGAACGGAGCGTCACTTCAAGAAGCAGGGGATAGGAGGCCCTGGCTACTGTCCGTTCGTGGGGAACTCGTCGGAGATCCGACGGCTGTACGCGGAAGCGAAGTCAGAGACGACCCCTGCGTTCGAGCATGATAACATCTTGAGGCGCGTGGTTCCATTTTACGAAAGGTGGTCTCGCGCGCACGGGAAAACTTTCCTGTACTGGTTCGGTTCAACACCCCGGTTGGCGATAACTGAACCGGACATGATTAAGGAGGTGCTGACGAATACGCGCGGTGAGTATGGGAAAGTTCCGTACAATCCTCAGTCGAAGTTGCTGTTTGGACAGGGCCTTGTAGGCCTGGAGGGTGAACAATGGGCTTTGCACAGAAGGATTATAAACCTGGCCTTTAACTTGGAGCTGGTTAAGGGATGGGTGCCAGATATTGTGGCAAGTGTGACAAAGATGGTGGAGAAATGGGAAGACCAAAGAGGAGGAAAAGATGAATTTGAGATAGAAGTGCACAGAGAGCTTCATGATCTTTCTGCTGATGTTATATCAAGAACTGCTTTTGGAAGCAGTTATGAAGAGGGAAAGCATATTTTCAACTTACAGGAGCAACAAATGGACCTTTTTTCACAGGCTATTAGAAGTGTCTATATCCCTGGATTCAGGATCTCCACATTACAAATGGAAGCCACCACCTTGTCCCAAGGCGAATTTTCTGTCACCGAATTCTTTACCAAACTCAGAATCATTTGGGATGAACTTGATAGTTTCCGTCCAGATCCTGTCTGTATATGCAAATCCAAATGTTCCTGCACTGTTTCTTCGATTCTTTCTCAACGGAAACACGAAGATCGTGCAATGCAACTTCTCCGAGGTTTGAATTCCCAGTATTTGCCAACTAGGAAGAACAGGGAGAGGTGGAGACTAGAAAAAGAAACACGTGAATCAATTCTGAAGCTTATTGAGACCAAGAGCAACACGGGAGAAAATGCAAGAAATGTACTAATTTCTTTGATGTGTTCCTACAAGAATGAGGTTGGTGGAGAAGAAAAGTTAGGGGTGGAAGAAATTATAGATGAATGTAAAACCATCTACTTTGCTGGAAAGGAAACTACAGCTAACTTGTTAACTTGGACACTTCTTCTATTAGCAAAACATCAGGAATGGCAAAGTAAGGCACGTGAAGAAGTTCTTCGTGTTATTGGACACAATCAACTTCCTGTTGCGGACAACTTAAGCGACCTTAAGATTGTTAGCATGATAATTAACGAAACACTTCGGCTCTATCCTCCAGCAGTGATGCTAATGAGGCAAGCCTCTAAAGATGTGATGCTTGGAAGCATTAATGTTCCTGCTAAGACTCAACTCTACTTGGCATTGACTGCAGTTCATCATGACAGAGAAATCTGGGGTGAAGATTGCCATAACTTCAATCCAACAAGATTTAGCGAGCCTCGGAAACATTTAGCTGCATTCATTCCTTTTGGATTAGGCCCTCGAACTTGTGTTGGGCAAAATTTGGCAATGGTTGAGGCAAAGATTGCTCTTTCTTTGATCATTCAAAGTTACAGTTTTGTGCTATCTCCAAACTATGTTCATGCTCCTGTACTTTTTATTACTTTGCAGCCTCAGTCTGGGGCGCAAATCATTTTCAGAAGGATTTCATATTGA 1740 0.4408 MSLLLGAVVLLVFLAVKFLYANLWVPRRTERHFKKQGIGGPGYCPFVGNSSEIRRLYAEAKSETTPAFEHDNILRRVVPFYERWSRAHGKTFLYWFGSTPRLAITEPDMIKEVLTNTRGEYGKVPYNPQSKLLFGQGLVGLEGEQWALHRRIINLAFNLELVKGWVPDIVASVTKMVEKWEDQRGGKDEFEIEVHRELHDLSADVISRTAFGSSYEEGKHIFNLQEQQMDLFSQAIRSVYIPGFRISTLQMEATTLSQGEFSVTEFFTKLRIIWDELDSFRPDPVCICKSKCSCTVSSILSQRKHEDRAMQLLRGLNSQYLPTRKNRERWRLEKETRESILKLIETKSNTGENARNVLISLMCSYKNEVGGEEKLGVEEIIDECKTIYFAGKETTANLLTWTLLLLAKHQEWQSKAREEVLRVIGHNQLPVADNLSDLKIVSMIINETLRLYPPAVMLMRQASKDVMLGSINVPAKTQLYLALTAVHHDREIWGEDCHNFNPTRFSEPRKHLAAFIPFGLGPRTCVGQNLAMVEAKIALSLIIQSYSFVLSPNYVHAPVLFITLQPQSGAQIIFRRISY 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04180 579 Pfam Cytochrome P450 81 232 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 Pfam Cytochrome P450 317 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 SUPERFAMILY Cytochrome P450 32 576 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PRINTS E-class P450 group I signature 379 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PRINTS E-class P450 group I signature 515 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PRINTS E-class P450 group I signature 399 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PRINTS E-class P450 group I signature 525 548 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 Gene3D Cytochrome P450 29 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 518 527 IPR017972 GO:0005506|GO:0016705
Vimu7g04180 579 Gene3D Cytochrome P450 279 577 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PRINTS P450 superfamily signature 525 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PRINTS P450 superfamily signature 516 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PRINTS P450 superfamily signature 390 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04180 579 PANTHER CYTOCHROME P450 FAMILY MEMBER 15 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04180 Vimu-Chr7 40443845 40450959 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04180 23 577 Cytochrome P450 AT3G14610 37.611 1.29e-119 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04180 - - qsu:112003639 558.14