Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04149 ATGGTTCCTAGTGAGATAAGAGGAGTCCAATATCTAGCACCTGAAAATCCATTCCTAGTTCCACCCAACTTTGGCCTTGTGCAAACTGACATTAATCCAAATCTCCATCTCAACACCCTCTTAAGCAATTTTCCAAACTGCCACTTCCCTCATTCAGGCCTTGAATTTCTTGCTCCTCCTTCCTCATACCTCAGCAGCAACTCAACCTCTGATGAAGCTGATGAAATCCACTTTAACATCATCGACGAAAGGAAACACAGGAGAATGATATCCAACCGAGAATCCGCCCGCAGATCAAGGATGAGGAAGCAAAAACACTTGGATGAACTCTGGTCGCAGGTTGTTAGGCTCAGAACTGAGAACCACAACTTGATTGACAAACTCAACCATATGTCTGAGTCCCATGACAGAGTCCTCCAAGAGAACACACGACTCAAACAAGAAGCTTCTGATCTCCGCCAAATGCTAGCAGACATGCAAATTGAAACCTCCTTTGCTTGCGCCATGGAAGAATTGGAGGACCTTCCATGCAACAAACCTGATCCCTCAAACCAATCAATCACTCCTGGAGATATGATTCATGAATGA 588 0.4473 MVPSEIRGVQYLAPENPFLVPPNFGLVQTDINPNLHLNTLLSNFPNCHFPHSGLEFLAPPSSYLSSNSTSDEADEIHFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHMSESHDRVLQENTRLKQEASDLRQMLADMQIETSFACAMEELEDLPCNKPDPSNQSITPGDMIHE 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04149 195 Coils Coil 128 162 - -
Vimu7g04149 195 Pfam bZIP transcription factor 84 142 IPR004827 GO:0003700|GO:0006355
Vimu7g04149 195 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 87 102 IPR004827 GO:0003700|GO:0006355
Vimu7g04149 195 CDD bZIP_plant_GBF1 85 136 IPR045314 GO:0003700|GO:0006355
Vimu7g04149 195 SMART brlzneu 80 144 IPR004827 GO:0003700|GO:0006355
Vimu7g04149 195 MobiDBLite consensus disorder prediction 175 195 - -
Vimu7g04149 195 SUPERFAMILY Leucine zipper domain 84 134 IPR046347 GO:0003700|GO:0006355
Vimu7g04149 195 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 167 IPR044521 -
Vimu7g04149 195 FunFam BZIP transcription factor 82 133 - -
Vimu7g04149 195 Gene3D - 82 137 - -
Vimu7g04149 195 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 82 145 IPR004827 GO:0003700|GO:0006355
Vimu7g04149 195 MobiDBLite consensus disorder prediction 179 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04149 Vimu-Chr7 40116322 40118028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04149 42 172 bZIP Transcription Factor Family AT3G30530 57.241 1.57e-47 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vimu7g04149 bZIP_1 6.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04149 - - gmx:778126 339.732