Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04136 ATGGTGGACTTGGGGAGGAGAAGAATGAGGGGTGAAAGGAGAAGGAAGTTGCGGCTTAGCAAAATCTATTCATTTGCATGTGGGAAACAATCTCTCAAGGAGGATCATTCGCAGATAGGAGAAAGAGGGTATACCAGGGTGGTGTTTTGTAATGAACCAGAGACCTTTGAGGCTGGGATAAGGAGTTACGCTGATAATTCTGTGAGCTCTACAAAGTATAACGTTGCTACTTTCTTGCCTAAGTCCCTTTTTGAGCAGTTTAGGAGGGTGGCTAATTTCTATTTTTTGGTTACTGGCATCTTGGCCTTCACAGAACTTGCTCCTTATACAGCTGTCAGTGCTATCCTTCCTCTGATTATTATCATTGGAGCAACTATGATCAAAGAGGGTATTGAAGATTGGCGAAGGAAACAGCAGGATATGGAGGTGAACAATAGAAGAGTTAAAGTGCATACAGGCCAAGGAATTTTTGAATATACTGAGTGGAAGAATCTGAAGGTGGGGCATATAGTGAAGATAATGAAGGACGAATTCTTTCCTGCAGACCTCCTACTGCTTTCCTCCAGTTATGAGGATGCATTCTGCTATGTTGAGACCATGAACTTGGATGGCGAGACAAATTTGAAGTTAAAACAAGGGTTGGAAGTAACTTCTTCCTTACACGAGGACTTTCAATTAGGTGATTTTAAAGCAACAATCAAATGCGAAGATCCAAATGCAAATTTATATTCATTTGTTGGGAGCATGGAGTATGAGGAACGGCAGTATCCTCTTTCTCCTCTGCAACTTCTTCTGAGGGACTCTAAACTTCGTAACACAGACTATATATTTGGAGCTGTCATCTTCACTGGTCATGACACAAAGGTAATTCAGAATTCCACTGATGCCCCTTCAAAGAGAACAAAGGTTGAGAAGAAGATGGATAGGGTTATCTACTTCATGTTTTGTATTGTGTTTCTAATGGCGTTCGTTGGATCTATTTTCTTTGGCATTGCAACCAGAGATGACTTGGACAATGGAATGATGAAAAGGTGGTACCTAAGACCAGATGACTCTACAATTTTCTTTGATCCTCAAAGAGCACCAGCTGCTGCTATATTTCATTGTTTCACAGCCTTAATGTTATACGGTTTCTTCATTCCCATCTCATTGTATGTTTCAATAGAAATTGTCAAAGTTCTTCAGAGCATCTTCATCAATCAAGATATCCATATGTACTATGAAGATGCAGACAAACCAGCCCATGCCCGTACTTCAAACTTGAATGAGGAACTTGGCCAAGTTGATACAATACTTTCTGATAAAACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCCATTGCTGGGGTGGCGTATGGCCGTGGTGTTACAGAGGTTGAGAAGGCAATGGATAGAAAGAATGGTTTTCCTTTGATTGACGATTCAGGGGACTCGCCTGTCAGAAATGCTCCCATCAAAGGATTTAACTTTACAGATGAAAGGATAATGAATGGAAATTGGTTTAACGAGCCTAATGCAAATGTTATTAAGAATTTTTTTCACTTATTGGCAATTTGCCATACAGCCCTACCTGAAGTTGATGAAGATACAGGAAATGTCTCATATGAAACTGAATCTCCAGACGAATCAGCATTTGTGATTGCAGCAAGAGAAATTGGTTTTGAATTCTATAAAAGGACTCAGACTAGTTTATCAATCTATGAATCGGATCCAGTTTCTGGTGACAAAATTGAACGGACATACAAACTTCTCAATGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATTGTGAAAGATGAAGAAGGGAGAATTTTGTTACTCTGTAAAGGTGCTGACAGTGTCATGTTTGAGAGGCTTGCCAAGGATGGGAGGGAGTTTGAAGAGAAAACCTTGGAACATGTACACGAGTATGCTGATGCAGGTCTAAGGACTCTAATTCTGGCATATCGTGAACTTGGTGAAAACCAATACAAGGAGTTTAATAATAAATTTTCTCAAGCAAAAAATTCAGTTAGTGAAGATCGGGAAACACTGATTGAGGAAATATCAGATAAGATTGAAAGGAATCTAATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAAAAGGGGTTCCTGATTGCATTGACAAGCTTGCCCAAGCTGGAATTAAGATCTGGGTTTTGACTGGGGATAAAATGGAGACTGCCATCAATATTGGTTTACTTCGACAAGGAATGAAACAAATTGTAATTCAGTTGGAAACTCCAGAAATTAGAGCATTGGAGAAGGCTGGAGACAAGGTGGCTATTGCTAAGGCTTGTCGAGAAAATATCCGCCATCAAATATCTGAAGCTGCTCAGCAGCTGACTGCCTCCAGAGGAACCTCTCAACAAGCATTTGCTTTAATAATTGACGGAAAATCACTTTCTTATGCTCTAGAGGATAATATGAAGAGCATGTTTTTGGACCTTGCAATTCGTTGTGCATCAGTTATTTGCTGCCGTTCCTCACCAAAGCAGAAGGCACTGGTCACTAGACTGGTAAAATCTGGTACGGGTAAAACTACATTAGCTATTGGTGATGGTGCTAATGATGTTGGAATGCTTCAAGAAGCAGATATCGGGATTGGAATCAGTGGCGTTGAAGGAATGCAGGCGGTTATGTCTAGTGATATTGCAATTGCACAGTTCCGTTATTTGGAAAGGTTGCTTCTTGTTCATGGACATTGGTGTTACCGAAGAATCTCATCAATGATATGCTACTTCTTCTACAAAAACATCACATTTGGGTTTACTCTATTCTTATATGAGGTGTATGCATCGTTCTCTGGGCAACCGGCATACAATGACTGGTTTTTGTCAGTCTATAATGTATTCTTTTCGTCACTTCCTGTGATTGCTCTTGGAGTCTTTGACCAGGATGTGTCTGCTCGGTATTGTCTGAGGTTTCCTATATTATATCAAGAAGGCGTGCAAAATCTTCTCTTCAGCTGGCGGAGAATTTTCAGCTGGATGCTAAATGGCTTTATAAGTGCCATAATAATTTTCTTTTTCTGCACAAAAGCAATGGAAATTCAAGCCTTTGATGAGCAGGGAAGAACTGCTGGCAGGGATATACTCGGAGCAACAATGTACACTTGTGTGGTTTGGGTTGTGAACTTGCAAATGGCTGTTGCTATAAATTACTTCACCTTGATTCAACACATTTTCATCTGGGGTTCCATTGCTCTCTGGTACCTTTTCCTCCTGGCATATGGTGCAATGTCTCCCAGCATTTCTGGAAATGCTTACAAAGTCTTCATTGAAACTCTTGCTCCATCACCCTCCTTCTGGATTGTGACATTGGTTGTCGTGATCTCAACACTCATCCCATACTTCTCTTACTCAGCAATACAGATGAGGTTCTTTCCCATGTATCACGAAATGGTACAATGGATAAGGCATGAGGGAAAGACAAATGATCCTGAATTCGTCGCTATGGTGCGGCAAAGATCACTGCGGCCAACAACTGTTGGTTCAACGGCTCGCTTGGTGGCTAAGGATAATGACTTCAAAGACAGCTCCTCTCAACCAGAAAGCAATGTTTCTTACATCTACTTCCTTGGTAATGGGACGGTGCACATAACCAAACCATCATTTGGCTGTCAAATTTGGCAAATGAATAAAACGTATACCTCATTTTTTGGCCATTTGAGGCTGTTGAGCTTTGAAGGCCAAGTTTTTCCAGGCCAAGATCCTTCATCTCCCTCCAGGTTGAGCTCTCCCTCTAGGTCGACCACTCCCTCAAGACTGAGCTCTCCTTTAGGTCGAGCTCCTACAGGTCAAGCTTTATAA 3840 0.4117 MVDLGRRRMRGERRRKLRLSKIYSFACGKQSLKEDHSQIGERGYTRVVFCNEPETFEAGIRSYADNSVSSTKYNVATFLPKSLFEQFRRVANFYFLVTGILAFTELAPYTAVSAILPLIIIIGATMIKEGIEDWRRKQQDMEVNNRRVKVHTGQGIFEYTEWKNLKVGHIVKIMKDEFFPADLLLLSSSYEDAFCYVETMNLDGETNLKLKQGLEVTSSLHEDFQLGDFKATIKCEDPNANLYSFVGSMEYEERQYPLSPLQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDAPSKRTKVEKKMDRVIYFMFCIVFLMAFVGSIFFGIATRDDLDNGMMKRWYLRPDDSTIFFDPQRAPAAAIFHCFTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYEDADKPAHARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGVTEVEKAMDRKNGFPLIDDSGDSPVRNAPIKGFNFTDERIMNGNWFNEPNANVIKNFFHLLAICHTALPEVDEDTGNVSYETESPDESAFVIAAREIGFEFYKRTQTSLSIYESDPVSGDKIERTYKLLNVLEFNSSRKRMSVIVKDEEGRILLLCKGADSVMFERLAKDGREFEEKTLEHVHEYADAGLRTLILAYRELGENQYKEFNNKFSQAKNSVSEDRETLIEEISDKIERNLILLGATAVEDKLQKGVPDCIDKLAQAGIKIWVLTGDKMETAINIGLLRQGMKQIVIQLETPEIRALEKAGDKVAIAKACRENIRHQISEAAQQLTASRGTSQQAFALIIDGKSLSYALEDNMKSMFLDLAIRCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWFLSVYNVFFSSLPVIALGVFDQDVSARYCLRFPILYQEGVQNLLFSWRRIFSWMLNGFISAIIIFFFCTKAMEIQAFDEQGRTAGRDILGATMYTCVVWVVNLQMAVAINYFTLIQHIFIWGSIALWYLFLLAYGAMSPSISGNAYKVFIETLAPSPSFWIVTLVVVISTLIPYFSYSAIQMRFFPMYHEMVQWIRHEGKTNDPEFVAMVRQRSLRPTTVGSTARLVAKDNDFKDSSSQPESNVSYIYFLGNGTVHITKPSFGCQIWQMNKTYTSFFGHLRLLSFEGQVFPGQDPSSPSRLSSPSRSTTPSRLSSPLGRAPTGQAL 1279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04136 1279 Gene3D - 549 700 IPR023299 GO:0000166
Vimu7g04136 1279 SUPERFAMILY HAD-like 420 905 IPR036412 -
Vimu7g04136 1279 Gene3D - 124 294 - -
Vimu7g04136 1279 PRINTS P-type cation-transporting ATPase superfamily signature 861 880 - -
Vimu7g04136 1279 PRINTS P-type cation-transporting ATPase superfamily signature 432 446 - -
Vimu7g04136 1279 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 1152 - -
Vimu7g04136 1279 MobiDBLite consensus disorder prediction 1244 1271 - -
Vimu7g04136 1279 Pfam Phospholipid-translocating P-type ATPase C-terminal 889 1139 IPR032630 -
Vimu7g04136 1279 Pfam Phospholipid-translocating ATPase N-terminal 48 114 IPR032631 -
Vimu7g04136 1279 NCBIfam phospholipid-translocating P-type ATPase 63 1146 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Vimu7g04136 1279 NCBIfam HAD-IC family P-type ATPase 832 943 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vimu7g04136 1279 CDD P-type_ATPase_APLT_Dnf-like 65 1010 - -
Vimu7g04136 1279 Gene3D - 701 901 IPR023214 -
Vimu7g04136 1279 MobiDBLite consensus disorder prediction 1244 1279 - -
Vimu7g04136 1279 Pfam Cation transport ATPase (P-type) 532 626 - -
Vimu7g04136 1279 SUPERFAMILY Calcium ATPase, transduction domain A 151 291 IPR008250 -
Vimu7g04136 1279 SFLD p-type atpase 414 912 IPR044492 -
Vimu7g04136 1279 FunFam Phospholipid-transporting ATPase 542 700 - -
Vimu7g04136 1279 FunFam Phospholipid-transporting ATPase 700 901 - -
Vimu7g04136 1279 ProSitePatterns E1-E2 ATPases phosphorylation site. 434 440 IPR018303 -
Vimu7g04136 1279 FunFam Phospholipid-transporting ATPase 124 294 - -
Vimu7g04136 1279 SUPERFAMILY Calcium ATPase, transmembrane domain M 60 1139 IPR023298 -
Vimu7g04136 1279 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 499 702 IPR023299 GO:0000166
Vimu7g04136 1279 SFLD C1.7: P-type atpase like 414 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04136 Vimu-Chr7 39946110 39955554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04136 17 1195 Primary Pumps ATPases AT1G68710 71.534 0.0 1842
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04136 K01530 - gmx:100811892 2187.15