Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04129 ATGCAGTTTGAGGATGTTACCTACAGCATAGCTTTTGAAAGGGACAAGAATGGTTGCGTATCTTCTCCAAAACCAAAACACAAAAGGACAGTGTTGAATGGTGTGACTGGTATGGTGGGGCCAGGGGAGGTGATGGCAATGTTGGGTCCATCAGGTAGTGGCAAGACCACTTTACTCACTGCTCTCGCCGGCCGGCTCACCGGAAAACTATCCGGTGCCGTAACGTATAACAACCACCCTTTCTCAAGCTCCATGAGGCGGAACATAGGTTTTGTGTCCCAAGAAGATGTGTTGTACCCTCACCTCACTGTGATTGAGACTCTAACTTATGCTGCCATGTTGAAGCTTCCGAGAAGTTTGACAAGGGAAGAGAAAATGGACCAAGCTGAGATGATCATTCAGGAACTAGGGTTGTCCCGGTGCCGAAACAACCTCGTTGGTGGTGGCGCAGCCGCTTTCCGGGGGATTTCCGGCGGGGAGCGAAAGCGGGTCAACATAGGACAAGAGATGTTGGTAAATCCGAGTTTGTTGTTGCTCGATGAGCCAACATCCGGGTTGGACTCCACCGCCGCCCAACGCATCGTGGCAATGCTTCATAGTCTTGCTCGAAGTGGTCGAACGGTGGTGACCACCATTCACCAACCTTCGAGCAGGTTGTTTTGGATGTTTGACAAGGTGTTGTTGTTGTCGGACGGGTACCCGCTTTTCACCGGGCAAGCATGTCGGGCCATGAATTATTTTGAGTCCATCGGGTTTGTGCCCACTTTCAATTTCATCAACCCGGCTGATTTTCTGCTTGACCTTGCTAATGGTATAGTTGTTGATGTCAAAGAAGATGAACATTTAGATCATCATGAGGATCAAGCTTCAATCAAACAATTTCTAGTTTCATCGTATAAGAAGAATGCATATCCTCTTCTAAAACAAGAGATTCAACAAAATCAGAGAGAACTAGCATCTTTTGCTTCAAGAACATTTAATCCTGAGAATCAATGGACCACTAGCTGGTGGGAACAATCCATGGTTCTGCTCAAGAGAGGTTTAAAAGAGAGGAGACATGACTCTTACTCTCATCTTAGAATTTTTCAAGTCTTGTCTGTCTCAATTCTCTCAGGACTTCTATGGTGGCATTCTAATCCCTCACATATACAAGATCAGGTAGGTTTGCTATTCTTCTTTTCCATCTTCTGGGGTTTCTTTCCTCTCTTCAATGCCATCTTTGCTTTTCCTCTGGATCGAGCAATGTTGATAAAAGAAAGATCATCCGGCATGTACCATTTATCCTCGTATTATGTTGCTAGAACAGTTGGGGACTTACCAATGGAGCTTGTGCTTCCTACTATATTTGTGACAATATCTTATTGGATGGGAGGTTTGAAGCCTTCCTTAGTTACATTTGTGGTAACTCTATTGATCATGCTTTTCAATGTGTTAGTTTCTCAAGGAATAGGCCTTGCACTTGGGGCCATTCTAATGGATGCCAAACAAGCGACAACCTTAGCCTCAGTGACTATGTTAGTGTTTCTCTTGGCTGGGGGTTACTACATTCAACAGATTCCATTCTTTATATCTTGGTTGAAGTACATCTCTTTTATTCACTATTGCTATAAGCTTCTTGTAGGAGTACAATACTCAGTAAATGAGGTTTATGAGTGTGGACCAGGGTTATTACATTGTAAGATTAGAGATTTTCCTGCTATAAAGTGTTTAGGACTTGATAATTTGTGGAAAGATGTCGTTCTTTTGACTATAATGTTGATTGGATATAGAGTTGTGGCATATCTAGCTTTGAAGAAGGTGCTTCATCATTGA 1812 0.4349 MQFEDVTYSIAFERDKNGCVSSPKPKHKRTVLNGVTGMVGPGEVMAMLGPSGSGKTTLLTALAGRLTGKLSGAVTYNNHPFSSSMRRNIGFVSQEDVLYPHLTVIETLTYAAMLKLPRSLTREEKMDQAEMIIQELGLSRCRNNLVGGGAAAFRGISGGERKRVNIGQEMLVNPSLLLLDEPTSGLDSTAAQRIVAMLHSLARSGRTVVTTIHQPSSRLFWMFDKVLLLSDGYPLFTGQACRAMNYFESIGFVPTFNFINPADFLLDLANGIVVDVKEDEHLDHHEDQASIKQFLVSSYKKNAYPLLKQEIQQNQRELASFASRTFNPENQWTTSWWEQSMVLLKRGLKERRHDSYSHLRIFQVLSVSILSGLLWWHSNPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRAMLIKERSSGMYHLSSYYVARTVGDLPMELVLPTIFVTISYWMGGLKPSLVTFVVTLLIMLFNVLVSQGIGLALGAILMDAKQATTLASVTMLVFLLAGGYYIQQIPFFISWLKYISFIHYCYKLLVGVQYSVNEVYECGPGLLHCKIRDFPAIKCLGLDNLWKDVVLLTIMLIGYRVVAYLALKKVLHH 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04129 603 Pfam ABC transporter 32 184 IPR003439 GO:0005524
Vimu7g04129 603 ProSitePatterns ABC transporters family signature. 156 170 IPR017871 GO:0005524|GO:0016887
Vimu7g04129 603 SMART AAA_5 41 234 IPR003593 GO:0016887
Vimu7g04129 603 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 594 - -
Vimu7g04129 603 FunFam ABC transporter G family member 22 19 250 - -
Vimu7g04129 603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 251 IPR027417 -
Vimu7g04129 603 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 256 IPR003439 GO:0005524
Vimu7g04129 603 Gene3D - 16 249 IPR027417 -
Vimu7g04129 603 Pfam ABC-2 type transporter 213 320 IPR043926 GO:0140359
Vimu7g04129 603 Pfam ABC-2 type transporter 339 544 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04129 Vimu-Chr7 39828081 39831148 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04129 16 217 Calmodulin-binding Proteins AT2G36910 30.516 2.04e-11 65.5