Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04108 ATGCCAACCCTCACCAATTTCTACGCCATTCAAGATTTATCCCACCACAAAACAAAAGACGATTGCTGGATCCTCGTCGGTGGAAAGGTATACGACGTGACACAATATTTGGATGATCATCCTGGTGGAGACGATGTAATCCTTGCTGCAACAGGGAAAGATGCAACAGAAGAATTTGAAGATGCTGGCCACAGCAAAAGTGCAAGAGAACTTATGGAGCAGTATTGCATTGGTGAGCTCGACCCATCATCTCCAGTTTCCACCATGCATAGCTATTCTGAAAAGTTCATGCAGCTGACAAAGCAATATTGGGCTGTTCCTGTGACCGTGGTTGGTATCTCAGTGGTAGTTGGTTTCTTATACTTACGTAAGAAGTAA 378 0.4418 MPTLTNFYAIQDLSHHKTKDDCWILVGGKVYDVTQYLDDHPGGDDVILAATGKDATEEFEDAGHSKSARELMEQYCIGELDPSSPVSTMHSYSEKFMQLTKQYWAVPVTVVGISVVVGFLYLRKK 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04108 125 SMART Cyt_b5_2 8 81 IPR001199 -
Vimu7g04108 125 Pfam Cytochrome b5-like Heme/Steroid binding domain 11 80 IPR001199 -
Vimu7g04108 125 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 91 IPR036400 -
Vimu7g04108 125 Gene3D - 3 85 IPR036400 -
Vimu7g04108 125 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Vimu7g04108 125 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Vimu7g04108 125 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Vimu7g04108 125 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Vimu7g04108 125 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Vimu7g04108 125 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Vimu7g04108 125 PANTHER CYTOCHROME B5 5 121 - -
Vimu7g04108 125 FunFam Cytochrome b5 type B 3 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04108 Vimu-Chr7 39585276 39591087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04108 1 124 NADPH P450 reductases AT1G26340 54.478 6.59e-51 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04108 K23490 - gmx:100500537 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g04108 7 39585276 39591087 Vimu7g04108 7 39585276 39591087 ECH