Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g04107 ATGTTGACAATGTTTTATTATGCTCTGGCTTTCACCATTTTTGCATTCTTTGCAGTGCTGAAATGGAACAGCATAAGATATGGAAGTCTCTTCAAAACTCATGCATTGGGATCTCCTACCGTTATTAGCACGGATCCTGAAATCAACAGATACATACTAATGAATGAAGCAAAAGGCTTGGTTCCTGGCTACCCGGACTCCATGAGGAAGATCTTAGGGACTAACATTTCTGAGGTTCATGGTGCAGTACACAAACGAATTAGAGGCTCACTCTTATCTCTCATTGGTCCAATCGCAGTTAAGGATCGTCTTTTGACAGAAGTTGATGACTTCATGAGCTCTTACCTTGACAATTGGGATGGTAAAATAGTTGATATTCAAGAAAAAACTGTTGAGATGTCATTCTTTGTTTCCATGAAAGCTGTGGTGGAAGATGAGCCAAACTCTTTCATCGAGCACTTCAAAGCCTCATTTGATAAAATGGCATTGGCAACAATATCCTTGCCATTTAAAATTCCAGGAACTCAATATTATCGAGGTTTGAAGGCTAGGGAAAAAGTGCTTACAATGCTAAGAGAGCTGATAGTCAAGAGAAGAGCTTCTTCAGCTACTCATAACGATATTCTTGATCAACTTGTGAGAAATGAGGATGGTAAGTACAAGCTAAATGACGAAGAAATAATGGAGCAAATCACCACAATTTTATACTCAGGCTATGAAACGGTATCAACTACTACAATGATGGCTATAAAATACCTATGTGATAACCCTGACATTCTACAGGCAGTAAGGGATGAGCATTTTGCAATCTTGCAGAAGAAACTGCATGGAGAACGGATCAACTGGGATGACTACAAGAGCATGAGCCAAACTCGTGCGGTGATACTTGAGACAATGAGATTGGCTAGTGTTGTTGCTGGAGTGATGAGGAGGACTACTAAAGATATAGAATTGAATGGTGTGTTTTTCAATTTGAGTCAATTGCTTTGA 990 0.3939 MLTMFYYALAFTIFAFFAVLKWNSIRYGSLFKTHALGSPTVISTDPEINRYILMNEAKGLVPGYPDSMRKILGTNISEVHGAVHKRIRGSLLSLIGPIAVKDRLLTEVDDFMSSYLDNWDGKIVDIQEKTVEMSFFVSMKAVVEDEPNSFIEHFKASFDKMALATISLPFKIPGTQYYRGLKAREKVLTMLRELIVKRRASSATHNDILDQLVRNEDGKYKLNDEEIMEQITTILYSGYETVSTTTMMAIKYLCDNPDILQAVRDEHFAILQKKLHGERINWDDYKSMSQTRAVILETMRLASVVAGVMRRTTKDIELNGVFFNLSQLL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g04107 329 PANTHER CYTOCHROME P450 26 23 320 - -
Vimu7g04107 329 PRINTS E-class P450 group I signature 292 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04107 329 PRINTS E-class P450 group I signature 24 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04107 329 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04107 329 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04107 329 Pfam Cytochrome P450 16 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04107 329 Gene3D Cytochrome P450 6 324 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vimu7g04107 329 SUPERFAMILY Cytochrome P450 16 323 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g04107 Vimu-Chr7 39560926 39565676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g04107 45 320 Cytochrome P450 AT5G38970 51.439 8.23e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g04107 K09590 - gmx:100818004 525.013